Paraburkholderia caribensis: K788_0005827 Help Entry K788_0005827      CDS       T04141                                  Name (GenBank) Lhr-like helicase   KO K03724   ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] Organism bcai  Paraburkholderia caribensis Brite KEGG Orthology (KO) [BR:bcai00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:bcai03400]     K788_0005827 Enzymes [BR:bcai01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      K788_0005827     5.6.2.6  RNA 3'-5' helicase      K788_0005827 DNA repair and recombination proteins [BR:bcai03400]  Prokaryotic type   Other factors with a suspected DNA repair function    DNA helicases     K788_0005827 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD_assoc WH_Lhr WH4_Lhr DEAD Helicase_C WH3_Lhr Cas3-like_C_2 ResIII HTH_IclR DprA_WH MarR HTH_24 MarR_2 GbpA_2 Fe_dep_repress TrmB GntR AAA_22 Motif Other DBs NCBI-ProteinID:  ALL66680 UniProt:  A0A0P0REA6 LinkDB All DBs Position 2:537432..541937 Genome browser AA seq 1501 aa AA seqDB search MRRPGPIFDVMTSASSAALGLADPLADFHPAVAGWFQKTFAAPTDAQVAAWPLIRNGRHT LVAAPTGSGKTLTAFLAALDELVRDGLAHGGALPDETLVVYVSPLKALSNDIRVNLQTPL EGIANELAERGLPVPEIRTAVRTGDTTQQERAALKKRAPHILVTTPESLYVLLGSASGRK MLATVRTVIVDEIHAMAGGKRGSHLALSLERLDALCGRRLPRIGLSATQKPIEAVARFLV GGASVDSDEPADCAVVDVGHVRERDLALEIPPVPLEAVMSNEAWELVYNRLAELVALHRT TLVFVNTRRMAERVARHLTERLGKDAVAAHHGSLAKEHRLDAEQRLKRGELRVLIATASL ELGIDIGDVDLVCQMGSPRAIAPFLQRVGRSGHHVGGMPKGRLFPASRDDLIECAALLDC VRRGELDLLHIPRAPLDVLAQQIVAEVCNAEWSEDALFERFRHAAPYAALEREQYDAVLR MLAEGYTSRHGPRAAYVHRDAVNGTLRGRRGAQLYAVTSGGTIPENADYTVVLEPQGLNI GTVNEDFAVESLAGDVFQLGNASYRIMRVESGRVRVEDAQGQPPNIPFWLGEAPGRSDEL SAGVARLRSEIERRLAVAKSTSPIASDTDAFSGSHDGVATVAEQTATVALDLEPAIAWLI EQTRLPEAAARQIVEYLARARQALGALPTQDTLVMERFFDESGGTQLVIHTPFGSRVNRA WGLALRKRFCRTFNFELQAAATEDAIVLSLTGAHSFALDEVWRYLRSTTAEHVLVQALLD APLFGVRWRWNATTALALPRYTGGRKTPPPLQRMRSDDLLATVFPDQAACLENIAGEREL PSHPLVDQTLDDCLHEAMDTDAWLALLRRIEGGQIALVSRDLPAPSPLAAEILTAKPYAF LDDAPIEERRTQAVLNRRYTSGPESADDLGALDADAIASVGEEAWPQVRNTDEMHEALMG LACITEAEAQRNENWPGWLAELAKTGHAARMQIAQHDALWLPAERLTCLRAIYPHAEVEP ALRAPKGFDEAWNEDDALVDVVRARLTGFGPLPLASIARALALPASTAAQALTRLEAEGY VMRGRFTPGATDEEWCERHLLARIHRYTVRRLRREIEPVERHDFMRFLFAWQRLTPDTRG EGRDALAAVLDQLEGFQAAASAWEEDILPARLKDYSITSLDELCRSGKIVWTRLTDRARG ASGPVRSTPIVLLPRRALPVWTALLDTSKQPELSPKAQLVFDTLTQHGAMFFDELSGDVR LLRVELENALGELVAAGLVNSDSFAGLRALLKPVAKRNASYYPSRRPRGAGALIGGMDDA GRWALLRRPVAAVADEAAAAPPSRRAATFAPEVIEHVALALLRRYGVVFWRLLEREAEWL PPWRDLLRVYQRLEARGQVRGGRFVNGLAGEQFALPEAIPLLREVRRHANDGAFVCVAGG DPLNLVGTLLPGNKVPAVAGNRVLYRDGVPVAALVAGEFHLPDDADGESKQLMRMRLARR Y NT seq 4506 nt NT seq  +upstreamnt  +downstreamnt atgcggcgccccggccccatcttcgacgtcatgacttccgcctcttccgccgccctcggg ctggccgacccgctggccgatttccatccggccgtggcgggctggttccagaagaccttt gccgcgcccacggacgcgcaggtcgccgcatggccgttgatccgcaatggccggcacacg ctcgtggccgcgccgaccggttcgggcaagacgctgaccgcgtttctcgccgcgctcgac gaactcgtgcgtgatggcctcgcgcacggcggcgcgttgccggacgaaacgctggtggtc tacgtatcgccgctcaaggcgctgtcgaacgatattcgtgtcaatctgcagacgccgctc gaaggcattgcgaacgaactggccgaacgcggcttgcccgtgcccgagatccgcaccgcc gtccgcacgggcgacacgacgcaacaggaacgtgccgcgttgaaaaagcgtgcgccgcac attctcgtcacgacgcccgaatcgctgtatgtgctgctcggctcggcctcgggccgcaag atgctcgcgacggtgcgcacggtgatcgtcgatgaaatccacgcgatggcaggcggcaag cgcggcagccatctcgcgctgtcgctggagcggctcgatgcgctgtgcggccggcgcctg ccgcgcatcggcctgtcggcgacgcaaaagccgatcgaagccgtcgcacgctttctggtc ggcggcgcgagcgtggacagcgacgaacccgccgactgcgcggtcgtcgatgtcggccac gtgcgcgagcgcgatctcgcgctggagattccacccgtgccgctcgaagcggtgatgtcg aacgaagcgtgggagctcgtctacaaccggctcgccgaactggttgcgctacaccgcacc acgctcgtgttcgtcaacacgcggcgcatggccgagcgcgtcgcgcggcatctgaccgag cgtctcggcaaggatgccgtcgccgcgcatcacggcagcctcgcgaaggaacatcgcctc gatgcggagcagcgtttgaagcgcggcgagttgcgcgtgctgatcgccacggcttcgctg gaactggggatcgatatcggcgacgtcgatctggtctgccagatgggctcgccgcgtgcg atcgcaccgtttctgcaacgcgtcgggcgttcgggccaccatgtgggcggcatgccgaag gggcggctatttcccgcttcgcgcgacgatctgatcgaatgtgcggcgctgctcgattgc gtgcgccgcggcgaactcgatctgctgcacattccgcgcgcgccactcgacgtgctcgcg caacagatcgtcgccgaggtctgcaacgccgagtggagcgaggacgcgctgttcgaacgc ttccgtcacgccgcgccgtatgccgcgctcgaacgcgagcaatacgacgccgtgttgcgc atgctcgccgaaggctacacgagccgtcacggtccgcgtgcggcgtacgtgcatcgcgat gccgtcaacggcaccttgcgcgggcggcgcggcgcgcagctttacgcggtcacgtcgggc ggcacgattccggagaatgccgattacacggtggtgctcgaaccacaagggctcaacatc ggcacggtcaacgaagacttcgccgtcgaaagcctcgcaggcgacgtgttccagctcggc aatgcgtcgtaccggatcatgcgcgtcgaaagcggccgcgtgcgcgtcgaggatgcgcaa ggccagccgccgaacattccgttctggctcggcgaagcgccggggcgcagtgatgaattg tcggcaggcgtcgcgcggctgcgctcggagatcgagcggcggctcgccgtcgcgaagagc acgtcacccattgcttcggataccgatgcattttccgggtcgcacgacggcgtcgcgacg gtcgccgagcaaacggccacggttgcgctcgatctcgaacccgcgatcgcgtggctcatc gaacagactcgtctgcccgaagcggccgcacgccagatcgtcgaatatctggcgcgcgcg cgccaggcactcggcgcgctgccgacccaagacacgctcgtgatggagcgctttttcgat gaatcgggcggcacgcagctggtgatccacacgccgttcggcagccgcgtcaatcgcgcg tggggcctcgcgttgcgcaagcgtttttgccgcacgttcaatttcgagttgcaggcggcc gcgacggaagatgcgatcgtgctgtcgctgacgggcgcgcacagcttcgcgctcgacgaa gtgtggcgctatctgcgctcgacgacggccgaacacgtgctggtccaggcgctgctcgac gcgccgctgttcggcgtgcgttggcgctggaacgcgacgacggcgctcgccttgccccgc tacacgggcggccgcaagacgccgccgccgttgcagcgcatgcgcagcgacgatctgctc gcgaccgtgtttcccgatcaggctgcgtgcctcgaaaacatcgccggcgagcgcgagttg ccgagtcatccgctcgtcgatcagacgctcgacgactgcctgcacgaagcgatggacacg gatgcgtggctcgcattgctgcgccggatcgaaggcgggcaaatcgcgcttgtgagccgc gacctgcccgcgccgtcgccgctcgccgcggaaatcctcacggcgaaaccgtacgcgttt ctcgacgatgcaccgatcgaggaacgccgcacgcaggccgtgctgaatcgccgctacacg agcggccccgaatccgccgacgatctcggcgcgctcgatgccgacgcgattgcgagtgtc ggcgaagaagcgtggccgcaagtgcgcaacaccgacgagatgcacgaagcgctgatgggc cttgcatgcatcacggaagccgaggcgcagcgcaatgaaaactggccaggctggctcgcc gaactcgctaaaacaggccacgccgcgcgcatgcagatcgcgcagcatgacgcgctatgg ctgcccgccgagcgtctgacatgcttgcgagcgatctatccgcacgccgaagtcgaaccc gcgctgcgtgcgccgaagggtttcgacgaagcgtggaacgaagacgacgcgctcgtcgac gtggtgcgcgcgcggctgacgggattcgggccgctgccgcttgcgtcgattgcacgcgcg cttgcgctgcccgcttcgactgccgcgcaggcgctcacgcgtctcgaggcggaaggttat gtgatgcgcgggcgcttcacgccgggcgccacggatgaagaatggtgcgagcggcatctg cttgcgcgtatccatcgctatacggtgcggcgcttgcggcgcgagatcgagcctgtcgaa cggcacgacttcatgcgcttcctgttcgcatggcagcgtctcacgcccgatacgcgcggc gaagggcgcgacgcgctcgccgccgtgctcgatcagctcgaaggttttcaggcggccgcg agcgcatgggaagaggacatcttgcccgcgcggctgaaggactattcgatcacatcgctc gacgagctgtgccgttccggcaagatcgtctggacgcggctcacggatcgcgcgcgcggc gcgagcggtccggtgcgcagcacgcccatcgtgctattgccgcgccgcgcgctgcccgtg tggaccgcgctgctcgatacgtcgaaacagccggagctgtcgccgaaagcgcaactggtg ttcgatacgctgacgcagcatggggcgatgtttttcgacgagctatcgggcgacgttcgt ctgctgcgcgtcgagctggagaacgcgcttggcgaactggtcgcggcgggtctcgtcaat tcggacagcttcgcggggctgcgtgcgttgttgaaacccgtcgcgaagcgcaacgcgtcg tactatccgagtcgccgtccgcgcggcgcgggcgcgttgatcggcggcatggacgatgcg ggacggtgggcgctgttgcggcggcccgttgccgctgtggcggatgaggccgctgcggcg cctccttccagacgtgcagctacctttgcacccgaagtgatcgagcatgtcgcgttggcg ctgttgcggcgctatggtgtcgtgttctggcggttgctggaacgggaagccgagtggctg ccgccgtggcgcgatctgctgcgtgtgtatcagcggctcgaagcgcgcggccaggtgcgc ggcgggcgcttcgtcaacggtctggcgggcgagcagttcgcgctgcctgaagcgattccg ctgctgcgtgaggtgcgccgccatgcgaacgatggtgcttttgtgtgtgttgcgggtggc gatccgctgaatctggtcgggacgttgctgcccggtaataaggtgcccgccgttgcgggg aatcgcgtgctgtatcgcgatggggtgcctgtcgcggcgctcgttgctggagagttccat ttgcctgatgatgccgatggcgaatcgaagcagttgatgaggatgcggctcgcgcggcgg tattga

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