Paraburkholderia caribensis: K788_0006870
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Entry
K788_0006870 CDS
T04141
Name
(GenBank) Exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
bcai
Paraburkholderia caribensis
Brite
KEGG Orthology (KO) [BR:
bcai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bcai03016
]
K788_0006870
Enzymes [BR:
bcai01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
K788_0006870
Transfer RNA biogenesis [BR:
bcai03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
K788_0006870
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
WHD_RNase_II
Motif
Other DBs
NCBI-ProteinID:
ALL64034
UniProt:
A0A0P0R7B8
LinkDB
All DBs
Position
1:1327020..1329101
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AA seq
693 aa
AA seq
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MNVFFEESGSFKAGSVMSRQGDAFQVELPGGRRAKVRAKDVLMEFEKPSAGELMEQADAA
AQDIDLDFLWECAPEDEFPFAALGAEYFGEAFGPVERAALILRMHGSPIYFRRKGRGQYQ
RAPEEQLKMALASLERKRQQALVQQGYEEELKAGRLPDGFQSKALGLLTKPDKNSIEYKA
LEAAAAARGISMARLMLECGGIPSARALHEARFLSEFFPHGTGFPSVTVGALPEDLPQAE
VEAFSIDDVTTTEIDDAFSVEHLSDGRVRIGIHIAAPALGIERGDAVDAIARGRLSTVYM
PGDKITMLPDSVVDKFTLAEGGLRPALSLYSIVNRETQEIVVSETRAELVYVKNNLRHNT
LDELVTEEALANGTGDYPHKEDIAVLWPFAQALFEKRQLARAGFGLKREVQRNTDFNFYV
DGEHVSITPRRRGSPLDTIVAELAILANSTWGAFLHDHGVPGIYRSQRAFGAPTGPKRTR
MQTTAAPHEGLGVSQYAWSTSPLRRYVDLVNQWQLIACVQHGVTAKLAAPFKPKDADLFA
VVQGFDDTYTAYADHQRRMEYFWCLRWLTQEGKKQVVASVVKGDLVRLEDVPLLLHVPGL
GVHARGTRLMLEVMSVDELTVEASVRPLHVLDAPTVTSGAEEEEEAEEEIIDAADESAES
EAEAQAEADSAAAEGDQPADSNDSTQHATEQGQ
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgttttcttcgaggaatcgggtagtttcaaggccggcagcgtgatgtcgcgtcaa
ggcgacgcgtttcaggtcgagctgccgggcgggcgccgcgcgaaagttcgcgcgaaagac
gtgctgatggagttcgagaagccgtcggcgggcgaactgatggaacaggccgatgccgcc
gcacaggacatcgacctcgacttcctgtgggaatgcgcgcccgaagacgaatttccgttt
gccgcgctcggcgccgaatactttggcgaggcgttcgggcccgtcgagcgcgccgcgctg
attttgcgcatgcacggctcgcccatctatttccgccgcaaggggcgcggccagtatcag
cgcgcgccggaagagcagttgaagatggcgctcgcgtcgctggagcgcaagcgtcagcag
gcgctcgtgcagcagggctacgaagaggaactgaaggcgggccgtctgccggacggattc
cagagcaaggcgctcggcctgctgacgaagcccgacaagaattcgatcgaatacaaggcg
ctcgaagcggcagcggcggcgcgcggtatttcgatggcgcgtctgatgctcgaatgcggc
ggcattccgtcggcgcgcgcgctgcacgaagcgcgcttcctgtcggaattcttcccgcac
ggcacgggctttccgtccgtgacggtcggcgcgttgccggaagatctgccgcaagcggaa
gtcgaagcgttctcgatcgacgacgtgaccacgacggaaatcgacgatgcgttctccgtg
gagcatctgtccgacggacgcgtgcggatcggcattcacatcgcggcgccggcgctgggc
atcgaacgcggcgatgccgtcgatgcgatcgcgcgcggccgtctgtcgaccgtctacatg
ccgggcgacaagatcacgatgctgcccgattccgtcgtcgataaattcacgctggccgaa
ggcggcttgcgcccggcgctgtcgctgtacagcatcgtgaaccgcgagacgcaggaaatc
gtcgtgagcgaaacgcgcgccgaactcgtctacgtgaagaacaatctgcgtcacaacacg
ctcgacgaactcgtcacggaggaggcgctcgccaatggcacgggcgactatccgcacaag
gaagacatcgcggtgctgtggccgtttgcgcaggcgctgttcgagaagcgccagctcgcg
cgcgccggtttcggcctcaagcgggaagtgcagcgcaatacggacttcaacttctacgtc
gacggcgagcatgtgagcatcacgccgcgccgccgcggttcgccgctcgatacgatcgtc
gccgaactcgccattctcgcgaactcgacgtggggcgcgttcttgcacgatcacggcgtg
ccgggcatctatcgctcgcagcgcgcattcggcgcgccgacgggaccgaagcgcacgcgg
atgcagacgacggccgcgccgcacgagggcctgggcgtctcgcagtacgcgtggagcacc
tcgccgctgcgccgctatgtcgacctcgtcaaccagtggcagctgatcgcgtgcgtgcaa
cacggcgtgacggcgaagctggcggcgccgttcaagccgaaggacgccgatctgttcgcc
gtcgtgcaaggcttcgacgacacctacaccgcgtatgccgatcatcagcgtcggatggag
tatttctggtgtctgcgctggctcacgcaggaaggcaagaaacaggtggtcgcttccgtc
gtgaagggcgatctcgtgcgtctcgaagacgtgccgctgctgctgcacgtgccgggtctc
ggcgtgcatgcgcggggcacgcggctgatgctcgaagtgatgtcggtggatgaactgacg
gtcgaggcatcggtgcggccgttgcacgtgctcgacgcgccgaccgtgacgagcggcgcg
gaagaagaggaagaggccgaagaagaaatcatcgacgccgccgacgaatccgccgaaagc
gaagccgaagcgcaagccgaagccgattcggcggcagcggagggcgaccagcccgccgac
tcgaacgattcgacgcaacacgcgacggagcagggccaatga
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