Paraburkholderia caribensis: K788_0007243
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Entry
K788_0007243 CDS
T04141
Name
(GenBank) ABC transporter, periplasmic spermidine putrescine-binding protein PotD
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
bcai
Paraburkholderia caribensis
Pathway
bcai02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bcai00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
K788_0007243
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bcai02000
]
K788_0007243
Transporters [BR:
bcai02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
K788_0007243
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
ALL69364
UniProt:
A0A0P0RKM5
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All DBs
Position
2:3336487..3337584
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AA seq
365 aa
AA seq
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MQDIKRGRRQAIKTIGAALAASTLPMPFINVRAQQQQNFSGKTLRLLTWSDDTGTAALRN
IAATFSAKTGAKVIADRADGTSGMVAKVKAAGDRPTYDVITLAGVGASGLGDAGLLVKPD
LDKLPNLKDVSPQYRTGANGFGVGYLLWSDGLIYNTSTVKTPPDSYEALWDPKYAGRIFL
PPPEWAEAVDLAIIAAKLAGGSQQNIEPGFKKLALLKDHVMTLGENPNQVADLFRTGSLD
IGGIYSPAFFPAQIRKPEYKMGVTYGMKEGFATQLMFTVIPKSHPGDADLIHAFINHSLD
AGVQGRMAADVLNGPVNSKAMIPAESSAYVPSPKQIAEKAVLHDDKALAAVQPAWIKRYT
EIFSA
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgcaagacatcaaacggggcagaaggcaggcaatcaagacgatcggcgcggcactcgcg
gcctcgacgttgccgatgccgttcatcaacgtgcgtgcccagcagcaacagaatttctcc
ggaaagaccctgcgtctgctcacctggtccgacgatacgggtacggccgcgttgcgcaac
atcgccgcgactttcagtgcgaagacgggtgcgaaagtgatcgccgaccgcgctgacggg
acgtccggcatggtcgccaaggtcaaggcggcgggcgaccgtcccacctacgacgtgatc
acgctggcaggcgtcggcgcgtccgggctcggcgatgcggggctgctcgtcaagccggat
ctcgacaaactgccgaacctgaaagacgtgtcgccgcaataccgcacgggcgcgaacggc
ttcggcgtcggttatctgctctggtcggacggcctgatttacaacacgtcgaccgtcaaa
acgccgcccgactcgtacgaagcgctgtgggacccgaagtacgcgggacgtattttcctg
ccgccgccggagtgggccgaggcggtcgatctcgcgatcatcgctgcaaagctcgcaggc
ggttcgcagcagaacatcgagccgggtttcaagaagcttgcgctattgaaggatcatgtg
atgacgctcggtgaaaacccgaatcaggtggccgatctgtttcgcaccggttcgctcgat
atcggcggcatctattcacccgcattcttccccgctcagatccgcaagccggagtacaag
atgggcgtgacgtacgggatgaaggaaggcttcgcgacgcaactgatgttcaccgtcatt
ccgaagtcgcatccgggcgatgccgacctgatccacgcattcatcaaccattcgctcgat
gcgggcgtgcagggccggatggccgccgacgtcctcaatggccctgtcaattcgaaggcc
atgattcccgccgagagcagcgcctatgtgccgagtccgaagcagatcgccgaaaaagcg
gtgctgcacgacgacaaggcgctcgcggctgtgcagcccgcgtggatcaagcgttacacg
gaaatcttctcggcatga
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