Paraburkholderia caribensis: K788_0007362
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Entry
K788_0007362 CDS
T04141
Name
(GenBank) Excinuclease ATPase subunit
KO
K03701
excinuclease ABC subunit A
Organism
bcai
Paraburkholderia caribensis
Pathway
bcai03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bcai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
K788_0007362
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcai03400
]
K788_0007362
DNA repair and recombination proteins [BR:
bcai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K788_0007362
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
K788_0007362
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
AAA_16
nSTAND1
DnaJ_CXXCXGXG
AAA_21
AAA_29
RsgA_GTPase
AAA_33
DUF4350
Motif
Other DBs
NCBI-ProteinID:
ALL71637
UniProt:
A0A0N7JWC6
LinkDB
All DBs
Position
unnamed:2387447..2390059
Genome browser
AA seq
870 aa
AA seq
DB search
MRGAREHNLKNVDVEIPRDALVVFTGVSGSGKSSLAFGTLYAEAQRRYFESVAPYARRLI
EQVGVPEVDAIEGLPPAVALQQQRGTPGARSSVGSVTTLSSLVRMLYSRTGSYPPKQPML
FAEDFSPNTVQGACPTCHGLGRVYEVTEKSMVPDDSLTIRERAIAAWPPAWHGQNLRDIL
VTLGYDVDTPWRDLPKKDRDWILFTDEQPTVPVYAGLTPKETRAALRRKDEPSYQGTFTG
ARRYVLHTFAHTQSALMKKRVSQYMVGNDCPDCHGKRLKKEALSVTFAGLDIAELSQLPL
AGLAAMLEPIAHGEWLEPGTAVTAKSAGKGSVLSKSAMRDAVDRRVAAGGSAHKASPDVR
RTPNLSEEKRLAAQRIAAELLERLAPLINLGLDYLALDRSTPTLSSGELQRLRLATQLSS
QLFGVVYVLDEPSAGLHPADGEALFSALQRLKEAGNSLFVVEHDLPMMRRADWLIDVGPA
AGEAGGHVVYSGPPAGLATVEASQTRRHLFAPPARVDRTPRGAAGWLRLGNITRNNLREL
NVAFPLGCLTTVTGVSGSGKSSLVSQALPELVANRLGGVIESADDDDQDPLLASSPTPTS
GHIEEGMEAIRRLVRVDQKPIGRTPRSNLATYTGLFDHVRKLFADTPLARKRRYSAGRFS
FNVAQGRCPTCEGEGFVSVELLFLPSVFAPCSTCHGTRYNTATLEITWQGKNIAEVLDLT
VDAACGFFAGETGVMRALNALRDIGLGYLRLGQPATELSGGEAQRIKLATELQRAQRGNT
LYILDEPTTGLHPADVDRLLVQLQGLVDAGNTVVVVEHDMRVAAQSDWVIDVGPGAGDAG
GTLVASGMPAEVAREATSRTASYLRQQFVG
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcggtgcgcgggagcacaacctgaaaaacgttgatgtggagattccgcgggatgcg
ctcgtcgtattcaccggtgtgtccggttcgggcaagtcctcgctggcgttcggcacgcta
tacgcggaggcacaacgtcgctatttcgaatctgttgcgccttacgcgaggcgtctgatc
gaacaggttggcgtgcccgaagtcgacgcaatcgaagggctgccgccggcggttgccttg
caacagcaacgcggcacaccgggcgcgcgctcgtcggtgggcagtgtgaccacgctgtcg
agcctcgtgcgcatgctgtattcgcgcacgggcagctatccaccgaaacagccgatgctg
ttcgccgaagacttctcgccaaacacggtccagggcgcctgtccgacatgtcatgggttg
gggcgcgtgtatgaggtgaccgaaaaatcgatggtgccggacgactcgctgaccatccgt
gagcgcgcgatcgctgcgtggcctcccgcatggcacggacagaatctgcgcgacatcctg
gtgacgctcggctacgacgtcgacactccctggcgcgacttgccgaaaaaggatcgcgac
tggatcctcttcaccgatgagcagccgacggtgcccgtgtacgccggcctcacgcccaaa
gagactcgcgccgcgctcagacgcaaggacgagccgagctaccagggaaccttcacgggt
gcgcgccgctatgtgctgcatacctttgcacacacccaaagcgcgctgatgaaaaagcgc
gtatcgcagtatatggtgggcaacgactgcccggattgccacggcaaacggctcaagaaa
gaggcgctttcggtgacattcgccgggctcgatatcgctgaactttcgcaattgccgctc
gcggggctggccgcgatgctcgaacccattgcgcacggagaatggctggaaccgggcacg
gctgtaacagctaaaagtgcgggcaaaggcagcgtgctcagcaagagcgccatgcgcgat
gccgtcgacagacgtgtcgccgctggtggatcggcgcataaagcttcgcctgacgtgcgg
cgtacgccgaacctgtccgaagagaagcgcctcgccgcgcagcgcattgcggccgagttg
ctcgaacggctggcgcctctcatcaatctgggcctggactatctcgcactcgatcgcagc
acgcctacgttgtcgtcgggcgaattgcagcgattgcggctcgccacgcaattatcgtcg
cagctcttcggtgttgtgtatgtgctcgacgaaccatcggccggcttgcatccggccgat
ggcgaggcgctttttagtgcgctccaaagactgaaggaagcgggcaactcgctgtttgtg
gtcgagcacgatctaccgatgatgcgccgtgccgactggctgatcgacgtgggtccggcc
gcgggcgaggcgggcggtcatgtggtctatagcggaccgccagcgggactcgcgactgtc
gaagcgtcacagacgcgtcgacatctgttcgccccgcccgcccgcgtcgatcgcacacct
cgcggtgccgcgggctggttgcggcttggcaatatcacccgcaataatctgcgtgagctg
aacgtggcgtttccgctcggctgcctgacgacagtcacgggtgtatcgggttcgggcaaa
tcgagtcttgtcagtcaggctttgccggaactggttgcgaaccggctggggggagtcatc
gaaagcgcggacgatgacgatcaggatccgttgctggccagctcgccaaccccgacgagc
ggccatatcgaggaagggatggaggcgatcaggcgactggtgcgcgtcgaccagaaaccg
atcgggcgcacgccacgctcgaaccttgcgacctacacggggctgtttgaccacgtgcgc
aagctgttcgctgacacgcctctcgcgcgcaagcgtcgctacagcgcgggtcgcttctcg
ttcaatgtcgcgcagggccgttgcccgacgtgtgaaggtgaagggttcgtcagtgtcgaa
cttctcttcctgccgagcgtattcgcgccatgctcgacctgccacggaacccgctacaac
acagcgacactggagatcacgtggcagggcaaaaacattgccgaagtgctagatctgacc
gtcgacgcggcctgcggtttcttcgccggtgaaacaggcgtgatgcgcgcgctaaacgca
ctgcgcgacattggccttggctacctgcggctcgggcagccggccacggagctgtcgggt
ggcgaagcgcagcgcatcaagctcgcgaccgaactgcaacgtgcgcagcgcgggaacacg
ttgtacatcctcgatgaaccgactaccgggctgcatcccgccgatgtcgaccggttgctg
gtacaactgcaagggcttgtcgatgcgggcaatacggtggtggtggtcgagcacgatatg
cgggtggctgcgcaaagcgactgggtcatcgacgtcggtccgggagccggagacgccggc
gggacgctcgtggcgagcggcatgccggctgaagtcgcgcgcgaggcgacgagtcggacg
gccagttatctgcggcaacaattcgtcgggtga
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