KEGG   Paraburkholderia caribensis: K788_0007362
Entry
K788_0007362      CDS       T04141                                 
Name
(GenBank) Excinuclease ATPase subunit
  KO
K03701  excinuclease ABC subunit A
Organism
bcai  Paraburkholderia caribensis
Pathway
bcai03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bcai00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    K788_0007362
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bcai03400]
    K788_0007362
DNA repair and recombination proteins [BR:bcai03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     K788_0007362
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      K788_0007362
SSDB
Motif
Pfam: ABC_tran UvrA_DNA-bind AAA_16 nSTAND1 DnaJ_CXXCXGXG AAA_21 AAA_29 RsgA_GTPase AAA_33 DUF4350
Other DBs
NCBI-ProteinID: ALL71637
UniProt: A0A0N7JWC6
LinkDB
Position
unnamed:2387447..2390059
AA seq 870 aa
MRGAREHNLKNVDVEIPRDALVVFTGVSGSGKSSLAFGTLYAEAQRRYFESVAPYARRLI
EQVGVPEVDAIEGLPPAVALQQQRGTPGARSSVGSVTTLSSLVRMLYSRTGSYPPKQPML
FAEDFSPNTVQGACPTCHGLGRVYEVTEKSMVPDDSLTIRERAIAAWPPAWHGQNLRDIL
VTLGYDVDTPWRDLPKKDRDWILFTDEQPTVPVYAGLTPKETRAALRRKDEPSYQGTFTG
ARRYVLHTFAHTQSALMKKRVSQYMVGNDCPDCHGKRLKKEALSVTFAGLDIAELSQLPL
AGLAAMLEPIAHGEWLEPGTAVTAKSAGKGSVLSKSAMRDAVDRRVAAGGSAHKASPDVR
RTPNLSEEKRLAAQRIAAELLERLAPLINLGLDYLALDRSTPTLSSGELQRLRLATQLSS
QLFGVVYVLDEPSAGLHPADGEALFSALQRLKEAGNSLFVVEHDLPMMRRADWLIDVGPA
AGEAGGHVVYSGPPAGLATVEASQTRRHLFAPPARVDRTPRGAAGWLRLGNITRNNLREL
NVAFPLGCLTTVTGVSGSGKSSLVSQALPELVANRLGGVIESADDDDQDPLLASSPTPTS
GHIEEGMEAIRRLVRVDQKPIGRTPRSNLATYTGLFDHVRKLFADTPLARKRRYSAGRFS
FNVAQGRCPTCEGEGFVSVELLFLPSVFAPCSTCHGTRYNTATLEITWQGKNIAEVLDLT
VDAACGFFAGETGVMRALNALRDIGLGYLRLGQPATELSGGEAQRIKLATELQRAQRGNT
LYILDEPTTGLHPADVDRLLVQLQGLVDAGNTVVVVEHDMRVAAQSDWVIDVGPGAGDAG
GTLVASGMPAEVAREATSRTASYLRQQFVG
NT seq 2613 nt   +upstreamnt  +downstreamnt
gtgcgcggtgcgcgggagcacaacctgaaaaacgttgatgtggagattccgcgggatgcg
ctcgtcgtattcaccggtgtgtccggttcgggcaagtcctcgctggcgttcggcacgcta
tacgcggaggcacaacgtcgctatttcgaatctgttgcgccttacgcgaggcgtctgatc
gaacaggttggcgtgcccgaagtcgacgcaatcgaagggctgccgccggcggttgccttg
caacagcaacgcggcacaccgggcgcgcgctcgtcggtgggcagtgtgaccacgctgtcg
agcctcgtgcgcatgctgtattcgcgcacgggcagctatccaccgaaacagccgatgctg
ttcgccgaagacttctcgccaaacacggtccagggcgcctgtccgacatgtcatgggttg
gggcgcgtgtatgaggtgaccgaaaaatcgatggtgccggacgactcgctgaccatccgt
gagcgcgcgatcgctgcgtggcctcccgcatggcacggacagaatctgcgcgacatcctg
gtgacgctcggctacgacgtcgacactccctggcgcgacttgccgaaaaaggatcgcgac
tggatcctcttcaccgatgagcagccgacggtgcccgtgtacgccggcctcacgcccaaa
gagactcgcgccgcgctcagacgcaaggacgagccgagctaccagggaaccttcacgggt
gcgcgccgctatgtgctgcatacctttgcacacacccaaagcgcgctgatgaaaaagcgc
gtatcgcagtatatggtgggcaacgactgcccggattgccacggcaaacggctcaagaaa
gaggcgctttcggtgacattcgccgggctcgatatcgctgaactttcgcaattgccgctc
gcggggctggccgcgatgctcgaacccattgcgcacggagaatggctggaaccgggcacg
gctgtaacagctaaaagtgcgggcaaaggcagcgtgctcagcaagagcgccatgcgcgat
gccgtcgacagacgtgtcgccgctggtggatcggcgcataaagcttcgcctgacgtgcgg
cgtacgccgaacctgtccgaagagaagcgcctcgccgcgcagcgcattgcggccgagttg
ctcgaacggctggcgcctctcatcaatctgggcctggactatctcgcactcgatcgcagc
acgcctacgttgtcgtcgggcgaattgcagcgattgcggctcgccacgcaattatcgtcg
cagctcttcggtgttgtgtatgtgctcgacgaaccatcggccggcttgcatccggccgat
ggcgaggcgctttttagtgcgctccaaagactgaaggaagcgggcaactcgctgtttgtg
gtcgagcacgatctaccgatgatgcgccgtgccgactggctgatcgacgtgggtccggcc
gcgggcgaggcgggcggtcatgtggtctatagcggaccgccagcgggactcgcgactgtc
gaagcgtcacagacgcgtcgacatctgttcgccccgcccgcccgcgtcgatcgcacacct
cgcggtgccgcgggctggttgcggcttggcaatatcacccgcaataatctgcgtgagctg
aacgtggcgtttccgctcggctgcctgacgacagtcacgggtgtatcgggttcgggcaaa
tcgagtcttgtcagtcaggctttgccggaactggttgcgaaccggctggggggagtcatc
gaaagcgcggacgatgacgatcaggatccgttgctggccagctcgccaaccccgacgagc
ggccatatcgaggaagggatggaggcgatcaggcgactggtgcgcgtcgaccagaaaccg
atcgggcgcacgccacgctcgaaccttgcgacctacacggggctgtttgaccacgtgcgc
aagctgttcgctgacacgcctctcgcgcgcaagcgtcgctacagcgcgggtcgcttctcg
ttcaatgtcgcgcagggccgttgcccgacgtgtgaaggtgaagggttcgtcagtgtcgaa
cttctcttcctgccgagcgtattcgcgccatgctcgacctgccacggaacccgctacaac
acagcgacactggagatcacgtggcagggcaaaaacattgccgaagtgctagatctgacc
gtcgacgcggcctgcggtttcttcgccggtgaaacaggcgtgatgcgcgcgctaaacgca
ctgcgcgacattggccttggctacctgcggctcgggcagccggccacggagctgtcgggt
ggcgaagcgcagcgcatcaagctcgcgaccgaactgcaacgtgcgcagcgcgggaacacg
ttgtacatcctcgatgaaccgactaccgggctgcatcccgccgatgtcgaccggttgctg
gtacaactgcaagggcttgtcgatgcgggcaatacggtggtggtggtcgagcacgatatg
cgggtggctgcgcaaagcgactgggtcatcgacgtcggtccgggagccggagacgccggc
gggacgctcgtggcgagcggcatgccggctgaagtcgcgcgcgaggcgacgagtcggacg
gccagttatctgcggcaacaattcgtcgggtga

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