Paraburkholderia caribensis: K788_0007584
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Entry
K788_0007584 CDS
T04141
Name
(GenBank) Choline dehydrogenase and related flavoprotein
KO
K03333
cholesterol oxidase [EC:
1.1.3.6
]
Organism
bcai
Paraburkholderia caribensis
Pathway
bcai01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
bcai00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00984 Steroid degradation
K788_0007584
Enzymes [BR:
bcai01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.3 With oxygen as acceptor
1.1.3.6 cholesterol oxidase
K788_0007584
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GMC_oxred_N
GMC_oxred_C
Abhydrolase_6
DAO
Abhydrolase_1
Pyr_redox_2
NAD_binding_8
FAD_binding_2
Fer4_6
FAD_oxidored
Fer4_7
Fer4_21
Pyr_redox
Fer4_2
Fer4_9
GIDA
Fer4_10
DLH
HI0933_like
Motif
Other DBs
NCBI-ProteinID:
ALL69231
UniProt:
A0A0P0RKF9
LinkDB
All DBs
Position
2:complement(3200761..3204150)
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AA seq
1129 aa
AA seq
DB search
MSSALSAMKDHYEVVVVGSGYGGAIAASRMARAKRSVCLLERGREFMAGDFPATPLEGVA
QMQYNTGVAQIGSPLALLEVHVNPDVNVVVGCGLGGTSLINANVALKPDARLWDDPRWPA
ALRADQANLDVCYERAKTMLGATPVPADYPNLPKLDALELSAKRLGMSDRFYRPPITVTF
KDGKNAAGVDQNRCVGCGDCNSGCNHGAKNSTHMNYLPDAAAHGAQIFTGAAVHSVVRDE
ARGVWCVRYQPADLKRELYDAPELFVTADIVILSAGTLGSTAILLRSQEAGLPVSKQLGK
HFTGNGDVLAFAFNTDKVINGVGWGTHPAGDIPPVGPCITGIIDHRNTPDVKDGFVIEEG
SVAAPIGLGLMGVLGLAAPAEGVEMPDPAGDAPFADEARIAESILRGPYHGAMRNTQTFL
VMAHDDESGQITVESGRARVSWPNAGKQPIYETVEKTLIEATGALGGSYVRNPISADLFQ
NRTVTVHPLGGCGMAEDAAHGVVDQAGRVFSGTDGDAVHEGLYVMDGAVMPLSLGVNPLL
TISALAERNCAQLAQSRGWQIDYDVAGHTAPPPALKIGLRFTETMIGTYFTGDAKPAGQR
DDPAEGTPISFTVTVVSDDLDDMLANPKHQAHMIGTLTCTALSPQPMTVNDGIFNLFVVD
ETNVERRNMNYRMTLDTVDGKHFYLTGQKIITHTSLTELWTQTNTLYATIRESDADDAPV
IGHATLIITPENFLKQQRTIEVTNTPDVETRLAYTLKFGRFFAGVLYTEYGGVAAPLQYF
DPDAPPRVRRALRAPAPQITYFKTDDGKTLRLARYHGGDKGPLLLIHGSGVSSRIFSTDL
IGTNLVEFLCAAHYDVWLVDLRVSIELPSATERTTADEIARYDIPAAVAKVRELTGVDEI
QVIGHCLGGLALSMSLMSGLKGVRSAVMSQVSAHPVPGVLQRVKAGLHTPQILQHLGIKD
MTAYTQHEEWPHNLLDDALKFFPVEHDETCNSAVCHRATFLYGLLYEHEQLDEQLHANLQ
ELFGIHDVELFNQLAAMVRAGHVVDANGDDVYMPNIEGMKLPIAFIHGAKNLCYLPTSTK
TTYDLLVKRFGPENYERHVIDGYGHIDCVFGKRAALDVFPTIVRYLDAH
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
ttgtccagcgccctttcggcgatgaaggaccattacgaggtcgtggtcgtgggttccggc
tatggcggcgcgattgccgcgagccgcatggcccgcgcgaaacgcagcgtgtgcctgctc
gaacgcggccgcgaattcatggcgggcgactttcccgccacgccgctcgaaggtgtcgcg
caaatgcagtacaacacgggcgtcgcgcagatcggctcgccgctcgcactgctcgaagtg
cacgtgaatcccgatgtgaacgtggtggtcggctgcggactcggcggcacgtcgctgatc
aacgcaaacgtcgcgctcaagcccgacgcgcgcctgtgggacgatccgcgctggcccgcc
gccttgcgcgcagaccaggcgaacctcgacgtttgctacgagcgcgccaaaacgatgctc
ggcgcgacgcccgtccccgccgactaccccaatctgcccaaactcgacgcgcttgaactg
tcggcgaaacggctcggcatgagtgaccgcttctaccgcccgcccatcacggtgacgttc
aaggacggcaagaacgcggcgggcgtcgaccagaaccgctgcgtcggctgcggcgactgc
aattcgggctgcaatcacggcgcgaagaactcgacgcacatgaactatctgcccgacgcc
gccgcgcatggcgcgcagattttcacgggcgcggccgtgcattcggtggtgcgcgacgaa
gcgcgcggcgtctggtgcgtgcgctatcagcccgccgatctgaagcgcgagttgtatgac
gcgcccgaactgttcgtcacggccgacatcgtgatcctgtcggcgggcacgctcggctcg
acggcgatcctgctgcgctcgcaggaagcgggcttgcccgtgtcgaaacagctcggcaag
cacttcacgggcaacggcgacgtgctcgcgttcgcgttcaacaccgacaaggtgatcaac
ggcgtcggctggggcacgcatccggcgggcgacattccgcctgtcggcccgtgcatcacg
ggcatcatcgaccatcgcaacacgcccgatgtgaaggacggcttcgtgatcgaggaagga
tcggttgccgcaccgatcggcctcggcctgatgggcgtgctcggcctcgcggcgcctgcc
gaaggcgtcgaaatgccggacccggcaggcgatgcgccgttcgcggacgaagcacgcatc
gccgaaagcatactgcgcggcccgtatcacggcgcgatgcgtaacacgcagacattcctc
gtgatggcgcacgacgacgaaagcggccagatcacggtcgaaagcggccgcgcacgcgtg
agctggccgaacgcgggcaagcagccgatctacgaaaccgtcgaaaagacgctgatcgaa
gcgacgggcgcgctgggcggctcgtatgtgcgcaacccgatctccgccgatctgttccag
aaccgcaccgtcaccgtgcatccgttgggtggctgcgggatggcggaagatgccgcgcac
ggcgtcgtcgatcaggcgggccgcgtgttttccggcacggacggcgacgcggtgcacgaa
gggctctacgtgatggacggcgcggtgatgccgctgtcgctcggcgtgaacccgttgctg
acgatctcggcgctggccgagcgcaattgcgcgcagcttgcgcagtcgcgcggctggcag
atcgactatgacgtggcgggccacaccgccccgccgcccgcgctgaagatcggtctgcgc
ttcaccgagacgatgatcggcacgtactttactggcgacgcgaagccggccggccaacgg
gacgatccagccgaaggcacgcccatcagcttcaccgtgaccgtcgtctccgacgatctc
gacgacatgctcgcgaacccgaagcatcaggcgcacatgatcggcacgctgacgtgcacc
gccctgtcgccgcaaccgatgaccgtcaacgacggcatcttcaacctgttcgtcgtcgac
gaaaccaacgtcgagcggcgcaacatgaactaccggatgacgctcgacaccgtagacggc
aagcacttttatctgaccggtcagaagatcatcacgcatacgtcgttgacggaactgtgg
acgcagacgaacacgctctatgcgacgatccgcgaatccgatgccgacgacgcgcccgtc
atcggtcatgcgacgctcatcatcacgccggagaacttcctcaagcagcagcgcacgatc
gaagtgacgaatactcccgacgtcgaaacgcgccttgcgtatacgctgaaattcggccgc
ttttttgcgggcgtgctgtacacggaatacggcggcgtcgcggcgcccttgcagtatttc
gatcccgacgcgccgccgcgcgtgcgccgtgcgttgcgcgcgcccgcgccgcagattacc
tacttcaagaccgatgacggcaagacgctgcggcttgcccgttatcacggcggcgacaag
ggcccgctgctactgattcatggctccggcgtatccagccgcatcttctcgacggacctg
atcggcacgaacctcgtcgagtttctgtgtgccgcgcattacgacgtctggctcgtcgat
ctgcgcgtgagcatcgaactgccgagcgcgaccgaacgcaccaccgccgatgaaattgca
cgctacgacattcccgccgctgtcgcgaaggtgcgcgaactgacgggcgtcgatgagatt
caggtcatcgggcattgcctgggcgggctggccttgagcatgtcgctgatgtcgggactc
aagggcgtgcgctccgcggtgatgtcgcaggtgtcggcgcatcccgtgccgggagtgttg
cagcgggtcaaggcgggactgcacacgccgcagattcttcagcatctgggcatcaaggat
atgaccgcgtatacccagcacgaggaatggccgcacaacctgctcgacgatgcgctgaag
ttcttccccgtcgagcacgacgaaacgtgcaacagtgccgtgtgccatcgcgcgacattc
ctgtatggcctgctctacgagcacgagcaactcgacgagcagctgcacgcgaacctgcag
gagctattcggcattcacgatgtcgagctcttcaatcagctcgcggcgatggtgcgcgcg
ggacacgtggtcgatgcgaatggcgacgatgtgtatatgccgaacatcgaaggcatgaag
ctgcccatcgcgttcattcatggggcaaagaatctctgctatctgccaaccagcacgaag
acgacctacgatcttctggtgaaacggttcgggcccgagaactacgaacgacatgtgatc
gacggatatggacatatcgattgcgtgttcggcaagcgcgcggcgctcgatgtcttcccg
actatcgtcaggtatctggacgcgcattga
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