Paraburkholderia caribensis: K788_0007960
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Entry
K788_0007960 CDS
T04141
Name
(GenBank) RNA polymerase, sigma 38 subunit, RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
bcai
Paraburkholderia caribensis
Brite
KEGG Orthology (KO) [BR:
bcai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bcai03021
]
K788_0007960
Transcription machinery [BR:
bcai03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
K788_0007960
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
HTH_20
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
ALL65116
UniProt:
A0A0P0RA29
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All DBs
Position
1:2460322..2461416
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AA seq
364 aa
AA seq
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MPKSKRRPSQAETESVSRATPVSVDDVGASEVDDETVEDLDNANDSEERASGRDEESEGR
ESANDSAPDADDFRALLQAELTADTIQHYLNRISVKPLLTVEEEQRYSRLAKAGEFEARQ
VMIERNLRLVVSIAKGYLNRGVPLLDLIEEGNLGLMHAIEKFDPTRGFRFSTYATWWIRQ
SIERAIMNQARTVRLPVHVIRELNQVLRAKRHLEKNSMNSGEAAERRDASIDDIAYLTGK
TTDEVTDILALNEHTASLDAPLDLDPASSLLDLLSDDQSQSPDAEVQHRELETLTRAWLA
RLSDKHRHVIERRFGLNHIEPATLEELADEMGLTRERVRQIQQEALVRLKRFFASNGVRK
DAVL
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaatcgaagcgccgcccgtcgcaagcagagactgagtccgtgagccgtgccacg
cctgtttcggtggacgacgttggcgcttcggaggtcgacgacgagactgtcgaggatctc
gacaacgccaacgactccgaagagcgtgcgtcgggtcgcgacgaggaatccgaggggcgc
gagagcgcaaacgattccgcgcccgacgccgacgattttcgcgcgctcttgcaggccgag
ctcacggccgacacgatccagcactacctgaaccggatcagcgtgaagccgctgctcacc
gtcgaggaagagcagcgctactcgcgcctcgcgaaggcgggcgagttcgaagcccgccag
gtgatgatcgagcgcaatctgcggctcgtggtcagcatcgcgaagggctatctgaatcgc
ggcgtgccgctgctcgatctgatcgaagagggcaacctgggcttgatgcacgcgatcgaa
aagttcgatccgacgcgcggcttccgcttctcgacgtatgcgacgtggtggatccgccag
agcatcgagcgcgcgatcatgaatcaggcgcgtacggtgcggctgcccgtgcatgtgatc
cgcgagctgaatcaggtattgcgcgcgaagcgccacctcgaaaagaattcgatgaattcg
ggcgaagcggccgagcggcgcgacgcgagcatcgacgacatcgcgtatctgacgggcaag
acgacggacgaagtcaccgacatcctcgcgttgaacgagcacacggcgtcgctcgatgcg
ccgctcgatctcgacccggcgagcagcctgctcgatctgttgtccgacgaccagagccag
tcgcccgatgccgaggtgcagcatcgcgagctcgagacgttgacgcgcgcgtggctcgcg
cggctatcggacaagcaccgtcatgtgatcgagcgccgcttcgggttgaatcacatcgag
ccggccacgctcgaggagcttgccgacgaaatgggccttacgcgcgagcgtgtgcgccag
atccagcaagaggcgctcgtgcgtctgaagcgcttctttgcgtccaatggcgttcggaag
gacgctgttctctag
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