Bacillus caldolyticus: CWI35_03740
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Entry
CWI35_03740 CDS
T08314
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
bcal
Bacillus caldolyticus
Pathway
bcal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bcal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CWI35_03740 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcal03019
]
CWI35_03740 (rny)
Messenger RNA biogenesis [BR:
bcal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CWI35_03740 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AUI35754
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All DBs
Position
complement(719815..721371)
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AA seq
518 aa
AA seq
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MGSIIISALLALVIGAVVGFFVRKSIAEAKIGGAKAAAEQLIEEAKREADALKKEALLEA
KDEIHKLRTEAERDIRDRRSELQKQENRLMQKEENLDRKDEALNKREALLEAKEEALNER
QQHIEQMESKVEALVKQQQAELERISGLTRDDARQLILERVEKELSHEIAMMIKEAETRA
KEEADKRAKAILSLAIQRCAADHVAETTVSVVNLPNDEMKGRIIGREGRNIRTLETLTGI
DLIIDDTPEAVILSGFDPIRRETARIALDKLVQDGRIHPARIEEMVEKARREVDEHIREV
GEQTTFEVGVHGLHPDLIKILGRLKFRTSYGQNVLKHSVEVAFLAGLMAAELGEDEMLAR
RAGLLHDIGKAIDHEVEGSHVEIGVELATKYKEHPVVINSIASHHGDTEPTSVIAVLVAA
ADALSAARPGARSETLENYIRRLEKLEEIAESYEGVEKSYAIQAGREVRIMVKPDMIDDL
EAHRLARDIRKRIEEELDYPGHIKVTVIRETRAVEYAK
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgggttcgatcatcatctccgctttgcttgccttagtcattggtgccgttgttggcttt
tttgttcgcaaatcgattgccgaagcgaaaatcggcggggcgaaagccgctgccgaacag
ctgattgaggaggcgaaacgcgaggcggacgccttgaaaaaagaggcgcttctcgaagcg
aaagacgagattcataaactgcgtacggaggcggagcgtgatatccgcgaccggagaagc
gagctccaaaaacaagaaaaccgcctgatgcaaaaggaggaaaatctcgaccgcaaagat
gaagcgctcaacaaacgtgaggcgttgcttgaggcaaaggaagaagcgttgaacgaaaga
caacagcatattgaacaaatggaaagcaaagtggaagcgctcgtcaaacaacaacaagcc
gaacttgaacgcatttccggcctgacgcgcgacgatgcccgccagctcattttagagcgc
gtcgagaaagagctgtcgcatgagattgcgatgatgatcaaagaggcggaaacgcgggcg
aaagaggaggcagacaaacgggcaaaggcgattttgtcgcttgccatccaacgttgcgcc
gccgaccatgtcgccgaaacgactgtttccgtcgtcaatttgccaaacgacgaaatgaaa
gggcggatcatcgggcgcgaagggcggaacatccgcacgctcgagacgttgaccggcatc
gatttgatcatcgacgatacgccggaagcggtcattttgtccggatttgacccgattcgc
cgcgagacggcgcgcatcgcgctcgataagcttgtgcaagatggccgcatccatccagcg
cgcattgaggaaatggtcgaaaaggcgcgccgcgaagtggatgagcatatccgcgaagtc
ggcgaacagacgacgtttgaagtcggtgttcacggcttgcatccggatttgatcaaaatt
ttagggcggctcaagttccgaacgagctacggacaaaacgtcttaaaacactcggtggaa
gtggcgtttttagccggactgatggcggccgagcttggggaggacgaaatgctggcgcgc
cgggccggcttgcttcatgacattggcaaagcgatcgaccacgaagtcgaaggaagccat
gtggaaatcggcgttgagctggcgacgaagtataaagaacatccggtcgtcatcaacagc
atcgcttcccaccatggcgatacggaaccgacgtcggtcatcgctgtgctcgtcgcggcg
gccgatgcgctgtcggcggcgcggccgggagcgcgcagcgaaacgctggaaaactatatc
cgtcgtctagagaagcttgaagaaatcgccgaatcgtacgaaggcgttgaaaaatcgtac
gccattcaagctgggcgtgaagtgcgcattatggtcaaaccagatatgatcgacgatttg
gaagcgcaccggctggcgcgtgacatccgcaaacgaatcgaagaagagctcgattacccg
ggccatattaaagtgacggtcatccgcgaaacgcgggcggtcgaatacgcgaaataa
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