Bacillus caldolyticus: CWI35_03915
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Entry
CWI35_03915 CDS
T08314
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bcal
Bacillus caldolyticus
Brite
KEGG Orthology (KO) [BR:
bcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bcal03016
]
CWI35_03915
Enzymes [BR:
bcal01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CWI35_03915
Transfer RNA biogenesis [BR:
bcal03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CWI35_03915
Prokaryotic type
CWI35_03915
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AUI35783
LinkDB
All DBs
Position
complement(754936..755844)
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AA seq
302 aa
AA seq
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MDGVLLLNKPKGMTSHDCVAKVRRLLGVKKAGHTGTLDPNVSGVLPICLGKATRIAEFLT
GTTKTYEGKVTLGAATTTEDADGDIIAARPVDRPIARAEIEAVFDSLTGEIEQTPPMYSA
VKVGGKKLYEYARAGIEVERPTRRVTIYELELLDEREQFFGETVSFRFRVTCSKGTYVRT
LAVMIGERLGYPAHMSDLIRTASGPFRLEDCVTFEDVERRAADGTADALLIPIERALFHL
PKYEINDKVAEKVKNGALLRLPAFLEKLDGPVVLVSPEREALALYVKHPTRPGLMKPLKV
FR
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atggacggggtattgctgctgaataaaccgaaagggatgacgtctcacgactgcgtggcc
aaagtgcgccgtctgcttggcgtaaaaaaagcgggacacaccggcacgcttgacccaaac
gtgtccggtgtgctgcccatttgccttggcaaggcgacgcgcatcgccgagtttttgacc
gggacgacgaaaacgtatgaaggaaaagtgacgcttggcgccgcgacgacaaccgaagat
gcggacggcgacatcatcgccgcccgtccggttgaccggccgattgcgcgcgcggaaatc
gaagcggtgtttgacagcttgaccggagaaattgagcaaacgccgccgatgtactccgcg
gtgaaagtgggcggcaaaaaactgtatgaatacgcgcgcgccggcatcgaagtcgaacgt
ccgacgcggcgcgtgaccatttatgagctcgaactgcttgatgaacgtgaacaattcttt
ggggaaacggtgtcatttcgctttcgcgtcacgtgcagcaaaggcacgtacgtgcgtacg
ctggcggtgatgatcggcgagcggctcggctatccggcgcatatgtccgacctcatccgt
acggcgtccgggccgtttcggcttgaagattgcgtaacgtttgaagacgttgagcgccgg
gcggccgacgggacggctgatgccttgctcatcccgatcgagcgggcgctttttcatttg
ccgaaatatgaaatcaatgataaagtagcagagaaggtaaaaaacggggcgctgctccgg
cttcccgcttttttagagaagcttgacgggccggtcgtgcttgtttcgcccgagcgggaa
gcgctggccctgtacgtgaagcatccgacgcgccccggcttgatgaaaccgctcaaagtg
tttcgttaa
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