Bacillus caldolyticus: CWI35_04205
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Entry
CWI35_04205 CDS
T08314
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bcal
Bacillus caldolyticus
Brite
KEGG Orthology (KO) [BR:
bcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bcal03032
]
CWI35_04205
03400 DNA repair and recombination proteins [BR:
bcal03400
]
CWI35_04205
Enzymes [BR:
bcal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CWI35_04205
DNA replication proteins [BR:
bcal03032
]
Prokaryotic type
DNA Topoisomerases
CWI35_04205
DNA repair and recombination proteins [BR:
bcal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CWI35_04205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Zn_ribbon_RPB9
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
AUI35834
LinkDB
All DBs
Position
complement(807939..810014)
Genome browser
AA seq
691 aa
AA seq
DB search
MSDYLVIVESPTKAKTIERYLGKKYTVKASMGHVRDLPKSQMGVDIDHGYEPKYITIRGK
GQVIKELKTAAKKAKKVFLAADPDREGEAIAWHLAHMLDLDIHSDCRVVFHEITKDAIQQ
SFQQPRAINMNLVDAQQARRVLDRLVGYNISPLLWKKVKKGLSAGRVQSVALRLIIDRER
EIREFQPEEYWTIQATFQKEGETFAASFYSIDGQKRDLKTEADVKAVLDRLNGTAFAVKT
VTKRERKRSPVPPFTTSSLQQEAARKLNFRTKKTMMIAQQLYEGIDLGSEGTVGLITYMR
TDSTRVAETAQQEAAAYIEATFGAMYVNQEKRKEKKSTNAQDAHEAIRPTSAFRDPDKVK
PYLTRDQFRLYKLIWERFIASQMAAAVLDTMSVELENNGVVFRASGSKVKFPGFMKVYIE
GTDDQTEEQDRILPDLEEEETVESETIESKQHFTQPPPRYTEARLVKTLEELGIGRPSTY
APTLDTIQKRNYVVLENKRFVPTELGEIVVELMLEFFPEIIDVEFTAKMEKELDEIEEGK
VEWIKVVDEFYREFEKRLKVAEKEMRAVEIKDEPAGIDCEVCGSPMVYKMGRFGKFIACS
NFPECRHTKPIVKEIGVKCPKCREGNIVERSTKRKRVFYGCDRFPDCDFVSWDKPLARPC
PKCAGLLVEKVLKKGVQVQCTACDYEERLEA
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgtcagactacttagttatcgtcgaatcgccaacgaaagcgaagacgatcgaacgatac
ttgggaaaaaaatatacagtcaaagcgtcgatgggccacgtccgcgatttgccaaaaagc
caaatgggcgttgatatagaccacggctacgagccgaaatacattacgatccgcggcaaa
ggccaggtgatcaaagagttgaaaacggcggcgaaaaaagcgaaaaaagtgtttcttgcc
gccgaccccgatcgcgaaggagaggcgatcgcctggcatttggcccacatgctcgatctg
gacattcactctgattgccgcgttgtctttcatgagatcacgaaggatgctattcagcaa
tcgtttcagcagccgcgcgcgatcaatatgaatcttgttgacgcccagcaggcgcggcgc
gtgctcgaccgcctcgtcggctataacatcagcccgctcttatggaaaaaggtgaaaaaa
ggattaagcgccggccgcgtccaatcggtggcgctgcgcctcatcatcgatcgggaacga
gaaattcgcgagtttcagccggaagaatattggacgattcaagcgacgtttcaaaaagaa
ggagagacgtttgccgcctcgttttacagtattgacggacaaaagcgcgatttaaagacg
gaggcggatgtgaaagccgtgctggaccgcttaaacggaacggcatttgcggtgaaaacg
gtgacaaaacgagagcgcaagcgcagccccgtgccgccgtttacgacgtcgtcgcttcag
caggaagcggcgcgcaaactgaatttccggacgaaaaagacgatgatgatcgcccagcag
ctgtacgaaggaatcgatcttggcagcgaagggacggtcggtttgatcacgtatatgcgc
accgattcaacgcgcgtcgccgagacggcgcagcaagaggcggcggcatatatcgaggcg
acgttcggcgctatgtatgtcaaccaggaaaagcggaaagagaagaaaagcacgaacgcc
caagacgcccacgaagcgattcgcccgacatcggcatttcgcgatccggacaaagtgaaa
ccgtatttgacgcgcgaccagtttcggttgtataaactcatttgggaacggttcatcgcc
agtcaaatggcggccgccgtgcttgacaccatgagcgtcgagttggaaaacaacggtgtc
gtgttccgcgccagcggctcgaaggtgaaatttccagggtttatgaaagtgtatattgaa
ggaacggacgatcaaacggaagagcaggaccgtatcctcccggatttggaagaagaggaa
acggttgagagcgaaacgatcgaatcgaagcagcactttactcagccgccgccgcgctac
acggaagcccgcctcgtcaaaacgttggaggaactcggcatcggccgcccgtcgacgtat
gccccgacgcttgatacgatccaaaaacgcaactatgtcgtccttgagaacaagcggttt
gtcccgaccgagctcggcgaaatcgttgtagagctgatgctcgaatttttcccggaaatt
atcgatgtcgagtttacggcgaaaatggaaaaagaattggacgaaattgaagaagggaaa
gtggaatggatcaaagtcgtcgacgagttttaccgcgaatttgaaaaacggttgaaagtg
gcggaaaaagaaatgcgcgcagttgagattaaggatgagccggccggcattgactgcgag
gtgtgcggcagtccgatggtgtacaaaatgggccgtttcggcaagtttatcgcctgctcg
aattttccggaatgccgccatacgaagccgattgtcaaagaaatcggcgtcaagtgcccg
aaatgccgcgagggcaacatcgtcgagcgcagcacgaaaagaaagcgggtgttttacggc
tgcgaccgtttcccggattgcgacttcgtctcgtgggataaaccgctcgcccgcccgtgt
ccgaaatgcgcggggctgcttgtggagaaagtgctgaaaaaaggtgtgcaagtgcaatgc
acggcgtgcgactatgaagagcggctagaagcttga
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