Bacillus caldolyticus: CWI35_04415
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Entry
CWI35_04415 CDS
T08314
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
bcal
Bacillus caldolyticus
Pathway
bcal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bcal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CWI35_04415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcal03400
]
CWI35_04415
Enzymes [BR:
bcal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CWI35_04415
DNA repair and recombination proteins [BR:
bcal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CWI35_04415
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
PriA_C
Zn_ribbon_PriA
Helicase_C
Zn_ribbon_6
AAA_16
AAA_30
PIF1
ATPase_2
AAA_19
TrwB_AAD_bind
ADDB_N
nSTAND_NTPase5
Zot
LexA_DNA_bind
Kinesin
DAP3
Zn_ribbon_ISL3
Motif
Other DBs
NCBI-ProteinID:
AUI35875
UniProt:
A0ABN5FQK6
LinkDB
All DBs
Position
complement(847434..849839)
Genome browser
AA seq
801 aa
AA seq
DB search
MKVASVIVDVPSRQTDRPFDYLIPERWQGIIQPGMRVTVPFGARRLQGFVVDVKDHSDIK
QLKPIEHVLDVVPVLNEELLDLGRYLTETTLCFAISAYQAMLPAAMRAKYEKTLRLTDEE
KRERLPDEVKPLFAGRTEAAWKEVEAAGLWRAAQKAVQQGVLEAVYKVKEKAGKKTVKHA
ALAIPSEQAKQELGSLPARQKEVLSFLLEKGKAASVAELQAVLGVSSAPLKALVDKGFVV
LNDVEVYRDPYEHRTFQPSEPPALTQAQEAALAKIAASVRAGEHRTFLLYGVTGSGKTEV
YMQAIDEALRQGKEAIVLVPEISLTPQMVERFKSRFGSKVAVLHSGLSVGEKYDEWRKIH
RKEVQLVVGARSAVFAPFENLGMIIIDEEHETSYKQEEMPRYHARDVAIYRARRHSCPVV
LGSATPSLETFARAAKGVYELLELPERISDRGLPDVHVVDMREELRSGNRSMFSRRLLDE
LRRRLERGEQAVLLLNRRGYSTFVMCRSCGYVIRCPHCDISLTYHRAGERMKCHYCGHEE
PLVPRCPSCGSEHIRFFGTGTQKVEEELTRLLPKARVIRMDVDTTGRKGAHEELLSRFAA
KEADILLGTQMIAKGLDFPNVTLVGVLAADTMLHLPDFRAAEKTFQLLTQVSGRAGRHEL
PGEVIIQTYTPDHYSIELAARHDYRAFYQREMALRKAHGYPPYYYLTLITAAHEEAPAAA
KAAEKIAAYLRKHLSHEAVVLGPVASPIARLHDRYRYQCMIKYKREPNLTAALKAVIDRY
QADAAHGGVTITVDTNPYMMM
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtagcatccgtgattgtcgatgtcccgtcccggcagacggaccgcccgtttgat
tatttgattccggaacgctggcaaggcatcatccagccgggcatgcgggtgacggtgccg
tttggggcgcggcgtttgcaagggtttgtcgttgatgtgaaagaccattccgacatcaaa
caactgaaaccgattgagcatgtgcttgatgtcgtgccggtgttaaacgaagagctgctt
gatcttggccgctatttaacggaaacgacgctttgttttgccatttcggcgtaccaggcg
atgctgccggcagcgatgcgggcgaaatatgaaaaaacgctccgtttgacagatgaagag
aagagagagaggttgccggatgaggtaaagccgctgtttgccgggcggacggaagccgct
tggaaagaggttgaggcggccggtttatggcgggcggcgcaaaaagcggtgcagcagggc
gtgctcgaggcggtctacaaggtgaaagaaaaagcgggcaagaaaacggtgaagcacgcc
gctcttgccattccatcggaacaggcgaaacaggagctcgggtcgctgccggcaagacaa
aaagaggtgctttcatttttgcttgaaaaagggaaggcggcgtcggttgccgaactgcaa
gcggtgcttggcgtctcctcagcgccgctgaaagcgctcgtcgacaaaggatttgtggtg
ctgaacgatgtcgaggtgtaccgcgacccgtacgagcatcgcacgtttcagccgagcgag
ccgccggcgctcacccaggcgcaagaggcggcgttggcgaagatcgccgcttcggtgcgc
gctggggagcatcgcacgtttttgctgtatggcgtcaccggcagcgggaagacggaagtg
tatatgcaggcgattgatgaagcgttgcgccaaggaaaggaagcgatcgttctcgtgccg
gaaatttcgctgacgccgcaaatggtcgagcgcttcaaaagccggttcggctcgaaagta
gcggtgcttcacagcgggctgtcggtcggcgaaaaatatgacgaatggcggaaaattcac
cggaaagaagtgcagcttgtcgtcggtgcgcgttcggcggtgtttgccccatttgaaaac
ttagggatgatcatcatcgatgaggagcatgagacgagctacaagcaagaagaaatgccg
cgctatcatgcgcgcgatgtcgccatttaccgcgctcgccgccacagctgcccggtcgtg
cttggcagcgccaccccctcgcttgagacgttcgcccgcgccgccaaaggggtgtacgag
ctgctcgagctgccggagcgcatcagcgaccgcggcctgccggacgttcatgtcgtcgat
atgcgcgaggagctgcgaagcggcaaccgttcgatgttttcacgccggttgcttgacgaa
ttgcgccgccggcttgagcgcggcgagcaggcagtgttgctgttgaatcgacgcggttat
tcgacgtttgtcatgtgccgcagctgcggctatgtcatccgctgtccgcactgcgacatt
tcgttgacgtaccatcgcgccggcgagcggatgaaatgccattattgcgggcatgaagag
ccgcttgtccctcgctgtccatcgtgcggaagcgaacacatccgcttttttggcactggc
acgcaaaaagtggaagaagaactgacgaggttgctgccgaaagcgcgcgtcatccgcatg
gatgtcgacacgaccggccgcaaaggggcgcatgaagagctgctttcccgttttgccgcc
aaggaagccgatattttgctcggcacgcaaatgatcgccaaaggacttgattttccgaac
gtcacgcttgttggtgtgctggcggccgacacgatgcttcatttgcccgatttccgcgcc
gcggaaaaaacgttccagctgttgacgcaagtgagcgggcgcgccgggcggcacgagctg
cccggcgaagtcatcattcagacgtatacgcctgaccactacagcattgaactggccgcc
cgccacgactaccgcgccttttaccagcgggagatggcgctgcgcaaagcgcacggctat
ccgccgtactattatttgacgctcattaccgccgcccacgaagaggcgccggctgcggcc
aaagcggcggaaaagatcgccgcctatttgcgcaagcatctgtcgcacgaagcggtcgtt
ctcggcccggttgcctcgccaatcgcccgtcttcacgatagatatcgctaccaatgcatg
ataaaatacaaacgggagccgaatttgaccgcggcgctcaaggcggtcatcgaccgctac
caagccgatgccgcccatggcggagtgacgattacggtcgacacgaatccgtatatgatg
atgtga
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