Bacillus caldolyticus: CWI35_07935
Help
Entry
CWI35_07935 CDS
T08314
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
bcal
Bacillus caldolyticus
Brite
KEGG Orthology (KO) [BR:
bcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bcal03009
]
CWI35_07935
Enzymes [BR:
bcal01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
CWI35_07935
Ribosome biogenesis [BR:
bcal03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CWI35_07935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Methyltransf_25
Cons_hypoth95
MTS
Methyltransf_15
Methyltransf_11
UPF0020
Methyltransf_32
Ubie_methyltran
Methyltransf_12
TRM5-TYW2_MTfase
PrmA
TehB
Motif
Other DBs
NCBI-ProteinID:
AUI36457
LinkDB
All DBs
Position
complement(1506063..1507466)
Genome browser
AA seq
467 aa
AA seq
DB search
MRGTDMAKQQMNIKIKKGEQFPVTIQRIGINGEGVGYFQKQVVFVPGALPGEEVIVEATD
IHPTYAEAKIKRIRKRSPNRIKPPCPLYDQCGGCQLQHLAYEAQLEAKRDIVIQALRRHA
RRLDVDKLDIRPTIGMDNPWHYRNKSQFQVGMKEGKVLAGLYGLNSHRLIDLSECRVQHP
QTTRVTNIVKTILQDLHIPIYNERTRMGVVRTIVARVGFHTGDIQLVLVTATKDIPRKEL
LIEEIRRRLPEVKSIVQNINGEKTSLIFGDETEVLAGDEYIQETLGDLSFELSARAFFQL
NPLQTVKLYDEVKKAAALTGTERIVDAYCGVGTIGLWLARDAKEVRGMDTIPEAIEDAQN
NAKKHGFTNTHYVVGKAEYWLPKWVNEGWKPDVIIVDPPRVGCDRALLETILHVRPKTVV
YVSCNPSSLARDLDALAAQYRVDYIQPVDMFPHTAHVEAVAKLTLQF
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgagagggaccgatatggcaaagcaacaaatgaacatcaaaatcaaaaaaggcgagcaa
tttcccgtgacgattcaacggatcggcattaacggcgaaggggtcggttatttccaaaaa
caagtcgtcttcgtccccggcgccttgccgggtgaagaagtcatcgttgaggcgacggac
atccacccaacctacgccgaggcgaaaatcaagcgcatccgcaagcgctcgccaaaccgc
atcaagccgccctgtccgctctatgaccagtgcggcggctgccagttgcagcacttggcg
tacgaggcgcagctcgaggcgaagcgcgacattgtcatccaggcgctccgccgccatgcc
cggcgcctcgatgtcgacaagcttgacatccgcccgacgatcggcatggacaacccgtgg
cattaccgaaacaaaagccagtttcaagttggaatgaaggaagggaaggtgctcgccggc
ctgtacggcctcaactcccatcggctcatcgacttgtcggaatgccgcgtccaacacccg
caaacgacgcgcgtcacgaacatcgtgaaaacgattttgcaagacttgcacatcccgatt
tacaacgagcggacaagaatgggcgtcgtgcggacgatcgtcgcccgcgtcggctttcat
accggcgacatccagcttgtgcttgtgacagcgacaaaagacattccgcgcaaagagctg
ttgatcgaggaaatccgccgccgtcttccagaagtgaaatcgatcgtgcaaaacatcaac
ggcgaaaaaacgtcgcttattttcggcgacgagacagaagtgctcgccggcgacgaatac
attcaagaaacgctcggcgatttgtcgtttgaactgtcggcgcgcgcctttttccagctc
aacccgttgcagacggtgaaattgtacgacgaagtgaaaaaagcggccgccctcaccgga
acggagcggatcgtggatgcctattgcggcgtcggcacgatcggtttgtggcttgctcgc
gatgccaaagaagtgcgcggcatggacacgattccggaagcgatcgaagacgcgcaaaac
aacgccaaaaagcatgggttcaccaacacgcactatgtcgtcggcaaagccgaatattgg
ctgccaaaatgggtgaacgaaggctggaagccggacgtcatcatcgtcgacccgccccgc
gtcggctgcgaccgggcgttgcttgaaacgattctccacgtccgcccgaaaacggtcgtc
tacgtctcatgcaacccgtccagcctcgcccgcgatctcgatgccttggctgcacaatat
cgcgtcgactacatccaaccggtggacatgtttccgcacacggcgcatgtggaagcggtg
gcgaaattaacgctgcaattttga
DBGET
integrated database retrieval system
