Bacillus caldolyticus: CWI35_08315
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Entry
CWI35_08315 CDS
T08314
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
bcal
Bacillus caldolyticus
Brite
KEGG Orthology (KO) [BR:
bcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bcal03009
]
CWI35_08315
Enzymes [BR:
bcal01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
CWI35_08315
Ribosome biogenesis [BR:
bcal03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CWI35_08315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
MTS
TRM5-TYW2_MTfase
Methyltransf_15
PrmA
Methyltransf_11
Methyltransf_4
Methyltransf_23
Cons_hypoth95
Ubie_methyltran
Motif
Other DBs
NCBI-ProteinID:
AUI36528
LinkDB
All DBs
Position
complement(1587145..1588533)
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AA seq
462 aa
AA seq
DB search
MTDSGKQSFITDIHQLDKKGAGQAVVWQEEEGRRKKLKLTVPSTLPGEKVRVLIDWPKRR
RAHARVEEVIEPHPERLAPSCPHFDRCGGCVWQHWRYEGQLRHKTEHVKTLLKEHGFDPG
VVRDTIGMEHPWHYRNKMEFTFSPEGLLGLHERGNFRQVISLETCLIAGEKIVKAAMEVA
RWARDHRLPGYHKDTHEGLLRHLMVRESFATGEVMVALFATEAPEGDLKEAAADLTERIT
KMLPQVKSLLWLENRAWADRTQAEQTHVLAGRDFIYDELCGFRYRLWFDTFFQTNPVQAA
KLVELALEMGKPQPHENMIDLFCGVGTFSLPFAKRVKALAGIEIVETSIESAKRNAKDNG
IDNTYFLARDARRGIDEVLEQFGRPELLLLDPPRSGAGGKVMRKIGRARPERVVYVSCNP
ETFASDITELVSFGYTLKTVQPVDMFPHTAHVECCALLVRGS
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
ttgacagacagcggaaaacaatcgttcattacggacattcatcagttggataaaaaagga
gcgggacaagcggtcgtttggcaggaagaagaagggaggagaaaaaagctcaaactcact
gttccgtccacgcttcctggtgaaaaggtgcgggttttgatcgattggccgaaacgccgg
agggcccatgcccgagtggaagaagtgatcgagccgcatccggaacggcttgcgccttcg
tgtccgcactttgaccgctgtggcggctgtgtctggcagcactggcgctatgaagggcag
ctgcgccataaaacggagcatgtcaagacgctcttgaaagagcacggatttgaccctggc
gttgtccgcgatacgattggcatggaacatccgtggcattaccgcaataaaatggagttt
acgttttctccggaagggttgcttggactgcacgagcgagggaacttccggcaagtcatt
tcgttggagacatgcctcattgccggcgagaagatcgtcaaagcggccatggaggtggcg
cgttgggcgcgcgatcaccggttgcctggttatcacaaagatacccacgaagggctgctt
cgccacctcatggtgcgcgagtcgtttgcgacaggagaggtgatggtggcgctctttgcg
accgaggcgccggaaggggatctgaaagaagcggcggccgatttgacggagcggatcacc
aaaatgctcccgcaagtgaaaagtttgctttggctcgagaatcgggcgtgggcggaccgc
acccaagcggaacaaacccatgtgttggccggacgtgatttcatttacgatgaattgtgc
ggcttccgctaccgcctttggtttgatacgttttttcaaacaaacccagtgcaggcggcc
aaattggttgaactggcgttggagatgggcaaaccgcagcctcatgaaaacatgatcgac
ctcttttgcggagtcgggacgttttccctgccatttgcgaaacgggtcaaagcgttagct
ggcattgaaattgttgaaacgtcgattgagtcggcgaagcgaaatgcgaaggacaacggc
attgataatacgtactttttggctcgggatgcaagacgcgggattgatgaagtgttggaa
cagttcgggcggccggagctgctgcttttggatcctccacgttcgggggcgggcgggaag
gtgatgcgcaaaatcggccgggcgcggccggagcgggttgtgtatgtctcgtgcaatccg
gagacgtttgcgtcagacattacggagctagtctcgttcggctatacattgaaaaccgtc
cagccggtggacatgtttccgcatacggcccatgtcgagtgctgtgcgttgcttgttcgg
ggatcatga
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