Entry |
|
Symbol |
pcrA
|
Name |
(GenBank) DNA helicase PcrA
|
KO |
|
Organism |
bcal Bacillus caldolyticus
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:bcal00001]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CWI35_08845 (pcrA)
03430 Mismatch repair
CWI35_08845 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:bcal03400]
CWI35_08845 (pcrA)
Enzymes [BR:bcal01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CWI35_08845 (pcrA)
DNA repair and recombination proteins [BR:bcal03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CWI35_08845 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
CWI35_08845 (pcrA)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
complement(1708312..1710486)
|
AA seq |
724 aa
MNFLSEKLLAHLNKEQQEAVKTTEGPLLIMAGAGSGKTRVLTHRIAYLMAEKQVAPWNIL
AITFTNKAAREMKERVQALLGGAAEDVWISTFHSMCVRMLRRDIDRIGINRNFSILDPTD
QLSVIKAILKDKNIDPKKFEPRTILATISGAKNDLLTPEQFAKRASTYYEKIVGDVYQEY
QQRLLRNHSLDFDDLIMTTIHLFDRVPDVLQYYQYKFQYIHIDEYQDTNRAQYTLVKKLA
DRFQNICAVGDADQSIYRWRGADIRNILSFERDYPNAKVILLEQNYRSTKRILQAANEVI
AHNVNRKPKRLWTENPEGKPIVYYEAMNEVDEAQFVARRIQEAVESGERRYRDFAVLYRT
NAQSRVIEEMFLKANIPYQIVGGLKFYDRKEIKDILAYLRVIANPDDDLSLLRIINVPKR
GIGASTIDKLVRYAAEHELSLFEALGELEMIGFSAKTAGALAAFRGQLEQWTQLQEYVPV
TELVEEVLDQSGYREMLKAERTIEAQSRLENLDEFLSVTKHFENVSDDKSLVAFLTDLAL
ISDLDELNGTDQAAEGDAVVFMTLHAAKGLEFPVVFLIGMEEGIFPHLRSLENEDEMEEE
RRLAYVGITRAEEELVLTNAQMRTLFGNIQMNRPSRFLDEIPAHLLETVSRGKPSVSRSA
SARLQAGGAIRVWKVGDRANHRKWGIGTVVSVRGEGDDQELDIAFPSPIGIKRLLAKFAP
IEKV |
NT seq |
2175 nt +upstreamnt +downstreamnt
atgaattttttatcggaaaagctgcttgcgcatttaaacaaagagcagcaagaagccgtt
aaaacgacagaaggcccattgctcatcatggcgggagcgggcagcggaaaaacgcgcgtg
ctgacgcaccggatcgcctatttgatggcggaaaaacaggtggcgccgtggaatatttta
gccattacgtttacgaacaaagcggcgcgtgaaatgaaggagcgggtgcaggcgctctta
ggcggggcggcggaagacgtgtggatttcgacgttccattcgatgtgcgtccgcatgttg
cgccgcgacattgaccgcatcggcatcaatcgcaatttttccatccttgacccgacggat
cagctttcggtcatcaaagcgattttgaaagacaaaaatatcgatccgaaaaaatttgag
ccgcggacgattttagcgacgatcagcggggcgaaaaacgatttgctcacgcccgagcaa
ttcgcaaagcgggcatcgacgtactacgaaaagatcgtcggcgacgtgtatcaagagtat
caacagcgccttctccgcaatcattcactcgatttcgacgatttgatcatgacgacgatc
cacttgtttgaccgcgtgccggatgtgcttcaatattaccagtataagttccagtacatc
catatcgatgagtaccaggatacgaaccgcgctcaatatacgctggtgaaaaagctcgca
gaccggtttcaaaatatttgcgccgtcggcgatgccgaccagtcgatttaccggtggcgc
ggggcggacattcgcaatattttatcgtttgagcgcgactacccgaacgcgaaagtcatt
ttgcttgaacaaaactaccgctcgacgaaacgcattttgcaggcggcaaatgaagtcatt
gcgcataacgtcaatcgaaaaccaaagcggttgtggacggaaaacccggaagggaagcca
atcgtctattatgaagcgatgaacgaagtggacgaagcgcaatttgtcgcccgccgcatt
caagaggcggttgagagcggggagcgccgctaccgcgattttgccgtgctttatcggacg
aacgcccagtcgcgcgtcatcgaggaaatgtttttaaaagcgaacattccgtaccaaatc
gtcggcggcttaaagttctatgaccggaaagaaattaaagacattctcgcttacttgcgc
gtcatcgccaaccccgatgacgatttgagcttgcttcgcatcatcaacgtgccaaagcgt
ggcatcggcgcctctacgatcgacaaacttgtccgctatgcggccgagcatgagctgtcc
ttgtttgaagcgctcggcgagctggagatgatcggcttcagcgcgaagacggccggggcg
ctcgccgcgtttcgcggacagcttgagcaatggacgcagctgcaagaatacgttccggtg
acggaacttgtggaggaagtgctcgaccaatcgggctaccgcgagatgctcaaggcggaa
cggacgattgaagcgcaaagccggcttgagaacttggacgagtttttgtcggtgacgaag
catttcgaaaatgtaagcgacgataaatcgctcgtcgcctttttaaccgacttggcgctc
atttctgatttggacgagctgaatgggacagatcaggcggccgagggcgatgccgtcgtc
ttcatgacgctgcacgccgccaaagggcttgagtttccggtcgtgtttttgattggcatg
gaagaaggcatttttccgcatcttcgttcactggagaatgaggatgaaatggaagaagag
cggcggctggcgtatgtcggcatcactcgggccgaggaagagctcgtattgacgaacgcg
caaatgcggacgctgtttggcaacatccaaatgaaccggccgtcgcgctttttagatgag
attcccgcgcatttgctggagacggtctcgcgtgggaaaccgtctgtttcccgttcagcg
tccgctcgcttgcaggcaggcggcgccatcagggtgtggaaagtcggagaccgggcgaac
catcggaaatggggaatcggtacggttgtcagtgtccgtggcgaaggtgacgaccaagaa
ctcgatatcgccttcccgagcccgatcggcattaaacgtctgctcgctaaatttgcgccg
attgagaaagtatag |