KEGG   Bacillus caldolyticus: CWI35_12520
Entry
CWI35_12520       CDS       T08314                                 
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
bcal  Bacillus caldolyticus
Pathway
bcal03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bcal00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CWI35_12520
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bcal03400]
    CWI35_12520
DNA repair and recombination proteins [BR:bcal03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CWI35_12520
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      CWI35_12520
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd Helicase_C UvrB ResIII UVR DEAD AAA_22 UFL1 AAA_19 Flavi_DEAD AAA_30 AAA_7 AAA_16 AAA_25 TrwB_AAD_bind UB2H AAA
Other DBs
NCBI-ProteinID: AUI37229
UniProt: A0ABM6QP50
LinkDB
Position
2431446..2433422
AA seq 658 aa
MEGRFQLVAPYEPQGDQPQAIAKLVDGLRRGVKHQTLLGATGTGKTFTISNVIAQVNKPT
LVIAHNKTLAGQLYSELKEFFPHNAVEYFVSYYDYYQPEAYVPQTDTYIEKDAKINDEID
KLRHSATSALFERRDVIIVASVSCIYGLGSPEEYRELVVSLRVGMEIERNALLRRLVDIQ
YDRNDIDFRRGTFRVRGDVVEIFPASRDEHCIRVEFFGDEIERIREVDALTGEVLGEREH
VAIFPASHFVTREEKMRLAIQNIEQELEERLAELRAQGKLLEAQRLEQRTRYDLEMMREM
GFCSGIENYSRHLALRPPGSTPYTLLDYFPDDFLIIVDESHVTLPQLRGMYNGDRARKQV
LVDHGFRLPSALDNRPLTFEEFEQKINQIIYVSATPGPYELEHSPGVVEQIIRPTGLLDP
TIDVRPTKGQIDDLIGEIRERVERNERTLVTTLTKKMAEDLTDYLKEAGIKVAYLHSEIK
TLERIEIIRDLRLGKYDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGR
AARNANGHVIMYADTITKSMEIAIQETKRRRAIQEEYNRKHGIVPRTVKKEIRDVIRATY
AAEETEMYEAKPAAAMTKQEREELIRTLEAEMKEAAKALDFERAAQLRDIIFELKAEG
NT seq 1977 nt   +upstreamnt  +downstreamnt
gtggagggccgttttcaattagtggcgccatacgaaccgcaaggcgatcagccgcaggcg
atcgccaagctcgttgacggcctgcgccgcggggtgaagcatcaaacgctgcttggggcg
acggggacgggcaaaacgtttacgatctcgaacgtgatcgcccaagtcaacaaaccgacg
cttgtcatcgcccacaacaaaacgctcgctggccaattgtacagcgagctgaaagagttt
ttcccgcacaacgccgtcgaatattttgtcagctattacgattactatcagccggaagcg
tatgtgccgcagacggatacgtacattgaaaaagacgcgaaaatcaacgatgaaatcgac
aaattgcggcactcggcgacatcagccttgtttgagcgccgggacgtgattatcgttgcg
agcgtgtcgtgcatttacggtttagggtcgccggaagagtaccgcgaactggtcgtatcg
ctgcgcgttgggatggagatcgagcgcaacgcgttgcttcggcggcttgtcgacatccaa
tacgaccgcaatgacatcgattttcgccgcggcacgttccgcgtccgcggcgatgttgtc
gaaattttccccgcgtcgcgcgatgaacattgcatccgcgtcgaatttttcggcgatgaa
atcgagcgcatccgcgaggtggacgccttaaccggcgaggtgctcggcgagcgcgagcat
gtcgccattttcccggcgtcgcacttcgtgacgcgcgaggagaaaatgcggctcgccatt
caaaacatcgaacaagagcttgaggagcggcttgccgaactgcgcgcgcaaggaaagctc
ttagaggcgcagcggcttgagcagcggacgcgctatgaccttgaaatgatgcgcgagatg
ggcttttgttccggcatcgaaaactactcgcgccatttggcgctgcggccgccaggctcg
acgccgtatacattgcttgactattttccggacgattttttgatcatcgttgatgagtcg
cacgtcaccttgccgcagctgcgcggcatgtacaacggcgaccgggcgcgcaagcaagtg
cttgtcgaccacggcttccgtctgccgtcggcgcttgacaaccggccgctcacgtttgaa
gagttcgagcaaaaaatcaatcaaattatttacgtctcagcgacgccggggccgtatgag
cttgaacacagcccgggcgttgtcgaacaaatcatccgcccgaccgggcttctcgaccca
acgatcgacgtccgcccgacgaaagggcaaatcgacgatttgatcggcgaaattcgcgag
cgcgtcgagcggaacgagcggacgttggtgacgacgctgacgaaaaagatggcggaagat
ttgaccgattatttgaaagaagcggggatcaaggtggcgtatttgcattcggaaattaag
acgctcgagcgcattgaaatcatccgcgatttgcggctcggcaaatacgatgtattggtc
ggcatcaacttgcttcgcgaagggctcgacatcccagaagtgtcgcttgtcgccattttg
gacgccgacaaagaagggtttttgcgctcggagcgctcgctcatccagacgatcggccgg
gcggcgcgcaacgcgaacggccatgtgatcatgtacgccgatacgatcacgaaatcgatg
gaaatcgccattcaagagacgaagcggcgccgcgcgattcaagaagagtacaaccgaaag
cacggcatcgtgccgcgcacggtgaaaaaggagattcgcgacgtcatccgcgcgacgtat
gcggcggaagagacggagatgtacgaggcaaagccggcggcagcgatgacgaaacaagag
cgggaagagctgattcgaacgctcgaagcggaaatgaaagaggcggccaaagcgctcgac
ttcgagcgggccgcccagctgcgcgatatcattttcgaattgaaagcggaagggtga

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