Bradyrhizobium canariense: BcanWSM471_00780
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Entry
BcanWSM471_00780 CDS
T08760
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
bcan
Bradyrhizobium canariense
Brite
KEGG Orthology (KO) [BR:
bcan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bcan03016
]
BcanWSM471_00780
Enzymes [BR:
bcan01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
BcanWSM471_00780
Transfer RNA biogenesis [BR:
bcan03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
BcanWSM471_00780
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
UFW41783
LinkDB
All DBs
Position
complement(172190..172804)
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AA seq
204 aa
AA seq
DB search
MTVRLHRGDLPDLSRYTGAVAIDTETMGLNPHRDRLCVVQLSPGDGSADVVQIPKGHTDA
PNLKALLANPANTKIFHFARFDVAVLYQTFGVMTGPIYCTKIASRLIRTYTDRHGLKDLV
REVLNVDLSKQQQSSDWGSDSLTEPQLAYAASDVLHLHGLRERLDAMLVREGRTALAKAC
FDFLPTRALLDLQGWAEEDIFAHS
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtacgcctgcaccgcggcgacctgcccgatctgtcccgctacaccggcgcggtg
gcgatcgacaccgagaccatgggcttgaacccgcatcgcgaccggctctgcgtggtgcag
ctctcgcccggcgacggcagcgcagacgtggtgcagatcccgaagggtcacaccgacgcg
ccgaacctgaaggcccttttggccaatcccgccaacacgaaaatcttccactttgcgcgg
ttcgacgtcgcggtgctgtaccagacgtttggtgtcatgaccgggccgatctactgcacc
aagatcgcctcccgcctgatccgcacctataccgaccgccatggcctcaaggacctcgtg
cgcgaggtgctcaatgtcgacctctccaagcagcagcaatcgagcgattggggttccgac
agcctgaccgagccgcagctcgcctacgccgcctccgacgtgctgcatctgcacggcttg
cgcgagcggctcgatgccatgctggtgcgggaaggccgcacggcgctggccaaagcctgt
ttcgatttcctgccgacccgcgctttgctcgatctccagggctgggccgaagaggacatt
ttcgcgcattcctag
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