Bradyrhizobium canariense: BcanWSM471_01280
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Entry
BcanWSM471_01280 CDS
T08760
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
bcan
Bradyrhizobium canariense
Pathway
bcan03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bcan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BcanWSM471_01280 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcan03400
]
BcanWSM471_01280 (xth)
Enzymes [BR:
bcan01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
BcanWSM471_01280 (xth)
DNA repair and recombination proteins [BR:
bcan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
BcanWSM471_01280 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
UFW41875
LinkDB
All DBs
Position
complement(270573..271388)
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AA seq
271 aa
AA seq
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MRFSLTTWNINSVRLRIDLVAKFLKSARPDVLCLQETKCIDDAFPLKRFKRLGYEHVALN
GQKGYHGVAIVSKIPFESKDIRTFCDKVDSRHISVSFGEKAGIAKPLVVHNFYVPAGGDI
PDPALNEKFDHKLRFLDEMKACEPLHPRGEDRHILVGDLNVAPHENDVWSHKQLLKVVSH
TPVETEKLQAALAAGEWVDVARERIPMSEKVYTWWSYRSADWTVGDRGRRLDHIWVSRTL
KDAVSDFKILRDARSWERPSDHVPVTVTLEV
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttttccctgacaacctggaacatcaattcggtgcggctgcgcatcgatctggtc
gcaaaatttctcaagagcgcgcggccggacgtgctgtgtctccaggagaccaagtgcatc
gacgacgcctttccgctgaagcgcttcaagcggctcggctacgagcatgtcgcgttgaac
ggccagaagggttatcacggcgtcgccatcgtctcgaagataccgttcgagtcaaaggac
atccgcaccttttgcgacaaggtggattcacgccacatctcggtatcgttcggtgagaag
gctgggatcgcaaaaccgctggtggtgcataatttctacgtgccggccggcggcgacatt
cccgatcccgcgctgaacgagaaattcgatcacaagctccgcttcctcgacgagatgaag
gcgtgcgagccgttgcatccgcgcggcgaggatcgccacattctggtcggcgatctcaac
gtcgccccgcatgagaacgacgtctggtcgcacaagcagcttctgaaagtggtctcgcac
acgcccgtcgaaaccgagaagctgcaggccgcgctcgccgccggcgagtgggtcgacgtc
gcgcgcgagcgcattccgatgtcggaaaaggtctacacgtggtggagctaccgctccgcc
gattggaccgtcggcgaccgcggccgcaggctcgaccacatctgggtctcgcgcacgctg
aaagatgcggtcagtgatttcaagattttgcgcgatgcgcggagctgggagcgcccgtcg
gaccatgtgccggttacggtgacgctggaggtgtga
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