Bradyrhizobium canariense: BcanWSM471_01940
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Entry
BcanWSM471_01940 CDS
T08760
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
bcan
Bradyrhizobium canariense
Pathway
bcan00300
Lysine biosynthesis
bcan00470
D-Amino acid metabolism
bcan01100
Metabolic pathways
bcan01110
Biosynthesis of secondary metabolites
bcan01120
Microbial metabolism in diverse environments
bcan01230
Biosynthesis of amino acids
Module
bcan_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bcan00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BcanWSM471_01940 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BcanWSM471_01940 (dapF)
Enzymes [BR:
bcan01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
BcanWSM471_01940 (dapF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DAP_epimerase
CntK_N
DUF2924
Response_reg
Motif
Other DBs
NCBI-ProteinID:
UFW41997
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All DBs
Position
402097..402972
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AA seq
291 aa
AA seq
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MSALANHAFAKMNGIGNEIVVVDMRDSASKVTPDDARAVASARGGVPYDQLMVLQKPRFD
GTEAFISIYNSDGSEAGACGNGMRCVVRRVFEKTGQSTATFETAAGLLNAWQGPAPDLYT
VDMGAPKFGWQDIPLDQEFRDTRYIELQIGPIDNPILHSPSVVSMGNPHAIFWVDDVNAY
DLERFGPLLENHPIFPERANITLAHIVDPQHITIRTWERGAGLTKACGSAACATAVAAAR
LKRAERNVEITLPGGKLGIEWRERDDHVLMTGTATFEYEGSFDPALFEPVG
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgctggccaaccacgcatttgccaagatgaacggcatcggtaacgagatcgtc
gttgtcgacatgcgcgattccgcctcaaaggtgaccccggacgatgcccgcgcggtggca
tcggcgcgtggcggcgtgccctacgaccagctcatggtgctgcagaagccgcgcttcgac
ggcaccgaagcgttcatcagcatctacaacagtgacggctccgaggccggcgcctgcggc
aacggcatgcgctgcgtggtgcggcgcgttttcgagaagaccggccagagcacggcaacg
ttcgagacggccgcgggcctgctcaacgcctggcagggtccggcgccggatctttatacg
gtggacatgggcgcgccaaaattcggctggcaggacattccgctcgaccaggaattccgc
gacacccgctacatcgaattgcagatcggcccgatcgacaatccgatcctgcattcgccc
tcggtggtcagcatgggcaatccgcatgcgatcttctgggtcgatgacgtcaacgcctac
gatctcgagcgtttcggtccgctgctggaaaaccatccgatcttccccgagcgcgccaac
atcacgctcgcccatatcgtcgatccccagcacatcacgatccgcacctgggagcgcggc
gccggcctgaccaaggcctgcggctcggccgcttgtgccacggcggttgcggccgcacgg
ctgaagcgcgccgagcgcaatgtcgagatcacgctgcccggcggcaagctcggcatcgaa
tggcgcgagcgcgacgatcacgtgctgatgacgggcacggcgaccttcgaatatgaaggc
agtttcgatccggcgctgttcgagccggtcgggtaa
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