Bradyrhizobium canariense: BcanWSM471_05830
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Entry
BcanWSM471_05830 CDS
T08760
Symbol
pimA
Name
(GenBank) dicarboxylate--CoA ligase PimA
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
bcan
Bradyrhizobium canariense
Pathway
bcan00061
Fatty acid biosynthesis
bcan00071
Fatty acid degradation
bcan01100
Metabolic pathways
bcan01212
Fatty acid metabolism
bcan02024
Quorum sensing
bcan04146
Peroxisome
Module
bcan_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
bcan00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
BcanWSM471_05830 (pimA)
00071 Fatty acid degradation
BcanWSM471_05830 (pimA)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
BcanWSM471_05830 (pimA)
09145 Cellular community - prokaryotes
02024 Quorum sensing
BcanWSM471_05830 (pimA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
bcan01004
]
BcanWSM471_05830 (pimA)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bcan04147
]
BcanWSM471_05830 (pimA)
Enzymes [BR:
bcan01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
BcanWSM471_05830 (pimA)
Lipid biosynthesis proteins [BR:
bcan01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
BcanWSM471_05830 (pimA)
Exosome [BR:
bcan04147
]
Exosomal proteins
Exosomal proteins of breast milk
BcanWSM471_05830 (pimA)
Exosomal proteins of breast cancer cells
BcanWSM471_05830 (pimA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
UFW42711
LinkDB
All DBs
Position
1247408..1249102
Genome browser
AA seq
564 aa
AA seq
DB search
MTHPGEQFYPEGVRWDDTIVQGTLPDLLAKAAAEYGPRTALEFRDRPISYTELAAMAERA
AAAFLRAGYGKNTSIALFLGNTPDHPVNFFGALKAGARVAHLSPLDGEIALTHKVSDSGS
RLLVTSNLAALLPTALKFLEKGLIDRLVVCEDDNWGKVGTPQAPIPDDPRIVTFKAFVEG
ATAPAQWPSVTADDVALLQYTGGTTGLPKGAMLTHGNLTSAVSIYDVWGKPSRATRGDVV
ERVICVLPLFHIYALTVVLLSSLSRGYLISLHQRFDVEAVMRDIEIKRATYFPGVPTMWI
AIAALPDLDKRDFSSLATIGSGGAPLPVEVANFFERKVGKKLKSGWGMTETCSPGTGHPP
TGPDKPGSIGLMLPGIELDVVALDDPTRVLPPGEVGEIRIKGPNVTRGYWNKPEGSAEAF
VDGRFVTGDIGYVDTDGYFFLVDRKKDMIISGGFNVYPQMIEQAIYTLPGVHEVIVLGIP
DSYRGEAAKAFIKLKPDAKPFSLDELRAQLAGKLGKHELPAEVEFVDDLPRTPVGKLSRH
ELRQQQKPSQSAQLATRLASGDRS
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgacccatcccggcgaacagttttatcccgagggcgtgcgctgggacgacaccatcgtc
cagggcacgctgcctgacctgctggcaaaagccgccgcggagtacggcccgcgcaccgca
ctggaattccgggatcgtccgatcagctacaccgaactcgccgcgatggcggagcgtgcg
gctgccgcgttcctgcgcgccggctacggcaagaatacgtccatcgccctgttcctcggc
aatacgccggaccatcccgtcaatttcttcggcgcgctgaaggccggcgcccgcgtcgcg
catctttcaccgctcgacggcgaaatcgcgctgacgcacaaggtctccgattccggttcg
cgcctgctcgtcacctccaacctcgcggcgctgctgccgaccgcgctgaaattcctggag
aagggcctgatcgatcgcctggtcgtctgcgaggacgacaattggggcaaggtcggcacg
ccgcaggcaccgatccccgatgatccccgcatcgtcactttcaaggccttcgtcgagggc
gccaccgcgccagcgcagtggccgtcggtgacggcggacgacgtcgcgctgctgcaatat
accggtggcaccaccgggttgcccaagggcgcgatgctgacccacggcaatctcacttcg
gccgtgtcgatttacgacgtctggggcaagccgtcgcgcgcgacgcgcggcgacgtcgtc
gagcgcgtgatctgcgtgctgccgctgttccacatctatgcgctcacggtcgtgctgctg
tcctcactcagtcgcggttatctgatctcgctgcatcagcgtttcgatgtcgaagcggtg
atgcgcgacatcgaaatcaagcgcgcgacctatttcccgggcgtgccgaccatgtggatc
gcgatcgcggcccttcccgatctcgacaagcgcgatttctcctcgctcgcgacgatcggc
tccgggggcgcgccgctgccggtggaggtcgcaaatttcttcgagcgcaaggttggcaag
aagctcaagagcggctggggcatgaccgagacctgctcgcccggcaccggccatccgccc
accggtcccgacaagcccggctcgatcggcctgatgctgcccggcatcgaactcgacgtc
gtcgcgctggacgatccgacacgcgtattgccgccgggcgaagtcggcgaaatccgcatc
aagggcccgaacgtcaccaggggctattggaacaagcccgagggatccgcggaggccttc
gtcgacggccgcttcgtcaccggcgacatcggatatgtcgacaccgacggctatttcttc
ctggtcgaccgcaagaaggacatgattatctccggcggcttcaacgtctatccgcaaatg
attgagcaggcgatctacaccctaccaggcgtgcacgaggtgatcgtgctcggcattccc
gactcgtatcgcggcgaggccgccaaagccttcatcaagctgaagccggacgcaaagccg
ttctcgctcgacgagctgcgcgcgcagctcgccggcaagctcggcaagcacgaattgccg
gcggaggtcgaattcgtcgacgatctgccgcgcacgccggtaggaaagctgtcgcgccat
gagttgcgccagcagcagaaaccatcacaatccgcccaacttgccacccgacttgcatca
ggagatcgctcttga
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