Bradyrhizobium canariense: BcanWSM471_07395
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Entry
BcanWSM471_07395 CDS
T08760
Symbol
nifA
Name
(GenBank) nif-specific transcriptional activator NifA
KO
K02584
Nif-specific regulatory protein
Organism
bcan
Bradyrhizobium canariense
Pathway
bcan02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bcan00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BcanWSM471_07395 (nifA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bcan03000
]
BcanWSM471_07395 (nifA)
Transcription factors [BR:
bcan03000
]
Prokaryotic type
Helix-turn-helix
Other families
BcanWSM471_07395 (nifA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
HTH_8
GAF_2
AAA_5
AAA
AAA_2
Mg_chelatase
MCM
AAA_16
bpMoxR
GAF_3
AAA_3
AAA_7
TIP49
AAA_30
CbiX
HTH_23
DUF815
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
UFW42960
LinkDB
All DBs
Position
1593522..1595327
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AA seq
601 aa
AA seq
DB search
MQHESNKSDGEDRERNGEVVMLDSISLREKPNSTSDADASACIVRSQEKSLSTIVEIAHT
LTGLCRLEAKLASVIERLRSLVQMRRGIVCLFEHDGGPEIIVEDGRSEDRDARCRVRLPQ
GAIDQIVASGQPLIVENVALHSAFSSSEVDMLNAGGHTRVAFIGVPIDVDGKVVGTLSID
RIADNGTRAQLDDDLRLLTMVASLLGQTTKLHCSFVRDRGRLMDEEFRLQKQLSELKPHG
RDRKKVQVEGMIGDSPALRALLDKIEVISKSNSTVLLRGESGTGKELVAKAIHERSARAK
RSFIKLNCAALTETVLESELFGHEKGAFTGAFNARKGRFEIADKGTLFLDEIGEISGSFQ
AKLLRVLQEQEFERVGGNQTIKVDVRVIAATNKNLEEAVARNEFRADLYYRISVVPLLLP
PLRERRTDIPLLAARFLRNFNNENGRTLVFDSSAIEVLMNCGFPGNVRELENCVQRTATL
ARGSSIVRDDFACCHGQCLSALLWKCGPAEMARQPSPTISLPARLSMPPTQAATPIQPVS
SELTPLGRPVVGAAKVTDRERVIAAMERSGWVQAKAARLLGLTPRQIGYALRRHGIEIKR
F
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgcaacacgaatccaacaagtccgatggggaggatcgagaaaggaacggagaagtcgtc
atgctagacagcatttccctgcgcgaaaagccaaactcaacctccgacgcggatgcttcc
gcttgtattgtgcggtcccaagagaaatcgctaagcacgattgttgaaatagcgcacacg
ctcactggcctatgtcggctcgaggctaagctggcgagcgtcatcgagcgcctgcgatcg
ctcgtgcagatgcggcgcggcatcgtatgtctgttcgagcatgacggcgggccggagatc
atcgtagaggacggcaggagcgaagaccgcgacgcccgctgccgggtgcgcttgccgcag
ggagcaatcgatcaaatcgtcgcgtcggggcagccgctcatcgtggagaatgtagcgctg
cattcggccttcagttcttcggaggtcgatatgctaaatgccggcggtcatacgcgtgtt
gcgttcatcggcgttcccatagacgttgacggcaaagttgtgggtacgctgagcattgac
cgcatcgcggacaatgggacgcgtgcgcagctcgacgacgacctccgccttctgacgatg
gtcgccagcctgctaggccagacgacgaagctgcattgctcgtttgtgcgcgatcgcggg
cgccttatggacgaggagttccggctgcagaagcaactctccgagctcaagcctcatggg
cgggaccgtaagaaggtccaagtcgaggggatgatcggcgacagcccggcgctgcgcgcg
ctacttgacaagatcgaggtgatctcaaaatcaaatagcacggttttgttgcgtggcgaa
tcgggtaccggcaaagagctggtcgcgaaggctattcacgagcgttcagcgcgcgccaaa
cgctcctttatcaagctgaattgcgcagccctcaccgagaccgtgctggaatccgaattg
ttcggacacgagaagggggcgtttacgggcgcattcaacgcgcgcaaggggcgcttcgag
atcgccgacaagggaacgctgtttctggatgagattggagagatctcgggctcgttccag
gcgaagcttctgcgcgtgcttcaggagcaggaattcgagcgggtgggcggcaatcagacg
atcaaagtcgacgtccgcgtgattgcggccacgaacaaaaatcttgaagaggcggtggca
aggaacgagttccgtgccgatctctattaccgcatcagcgttgttcctctgctattgccg
ccgctgcgggaaagacgcactgatattccgcttctcgccgctcgttttttgaggaacttt
aacaatgagaacggccgtactctggtattcgattcaagtgcgattgaggtcctcatgaat
tgcggatttcccggtaatgtccgtgagctcgaaaactgcgtgcagcggaccgcgacgcta
gcgcgaggatcgtcgatcgtaagagatgattttgcgtgctgccacgggcaatgcctgtcg
gctttgctatggaagtgtggaccggcggaaatggcccgacagccgagcccgacaatctca
ctgcccgcgaggctgagcatgccgccaacacaagccgccacacccattcagccggtgagc
agcgagctgacaccgctggggcgccccgtggtgggtgccgcgaaagtcaccgatcgcgag
cgcgtcatcgcagccatggaaagatccgggtgggtacaggcgaaggcggcgcgcctgctt
ggactgaccccgcgccagattggctacgccttgcgaagacacggcatcgagatcaaacgc
ttctga
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