Bradyrhizobium canariense: BcanWSM471_10315
Help
Entry
BcanWSM471_10315 CDS
T08760
Name
(GenBank) VCBS domain-containing protein
Organism
bcan
Bradyrhizobium canariense
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_4
FecR
Motif
Other DBs
NCBI-ProteinID:
UFW43442
LinkDB
All DBs
Position
complement(2243533..2248974)
Genome browser
AA seq
1813 aa
AA seq
DB search
MNYTGDFDAARPAVDGQGSHPLASSHGDSFAVQAHGHAPDGALLVPDPNLLFHGEYKRAG
VDLVLSNDGREFVVHDYFKGEKRAALSSPDGAHLSGDLVNALAGHVQYAQAAPSTATSQI
IGHVTKLAGNATAIRNGVSIILNNGDDVQKGDVLVTGSDSTLGVTFIDGTVFGLSSNARM
VLNEMIYDPNGSNNASLLSLIAGTISFVAGETAKHGDMKIDTPVATMGIRGTAVLTQISF
FVPLGGGDPQPHANFQVLVEPDGTTGSYVLFDKITLLPIGTVNQAGQMIQISGGNVSVSN
ALLSPEVQKLISDVFSLKFSANSDNTRLTTNFTDTVTPDSRGLAMNGAGGLAGIPNFNFT
IAPEKTAVFNQTGDLFIPFISIKSVDVISASDKASFTIADQVIITDSNPADVLVPYVPGT
ATIKSVSGPSTAPPGADLAKLLTLNAATGAISYDPAKFAFLGANQNVVVILEFDSRAGSE
IFHKALSLTITGSNDPATILGTATGTVMEDGGLTAHGVLMVHDVDTGQDNFQTAASLAGA
YGTFTFDPTTGEWSYTLDNTAAKVRALADGQVVHDTLTVKSADGTASQLIDITITGSNDA
AVISGTGIGAVKEDYKLTACGTLTVHDADTGEDHFQTPATLAGAYGTFTFNPATGDWSYT
LDNSAAKVQGLAGGQVVHDTLTVKSADGTASQLIDVTITGSNDAAAISGAVTGAVEEDGK
LTACGTLTVQDADTGQDYFQTPASLAGTYGAFTFDPATGDWSYSLDNSAAKVQALAGGEI
IHQTLTVKSADGTASQLIDVTITGSNDAAAISGAVTGAVKEDGKLTACGTLTVQDADTGQ
DNFQTPASLAGTYGTFTFDPATGEWSYTLDNSAAKVQALAGGEIVHDTLTVMSADGTASQ
LIDVTITGSNDAAVISGTATGAVKEDGRLTACGTLKVQDIDTGQDHFQTPASLAAAYGTF
TFDPASGEWSYTLDNSAPKVQALAGGQVVHDTLTVKSADGIASQLIDVTIAGSNDAAVIS
GTAIGTVKEDGKLSACGMLTVQDLDTGQDHFQTPASLAGTYGAFTFDPATGDWSYTLDNS
AAKVQALAGGQIVHDTLTVKSADGTASQLIDVTITGSDDAAAISGAAIGAVEEDGKLTAC
GTLTVQDADTGQDHFQIPGSPAGTYGTFTFDPATGDWGYTLDNSAAKVQGLVGGQVVHDT
LTVKSADGTASELIDVTITGKNDAAIISGKLSGNVEIPDDGPGSGKLTDTGKVTDTDIDN
NPNTFIPKPAGSATSHGYGTYQLTASGIWTYTLDYSNPTVHRLDEGQHLNDTFTVQTIDG
TAKVVTTTISDDDPPHRAPAGVAGSEINLGLADPFLQSGAIVTVTLAGVADDWIVTDEVR
SADGTWSVQTADPASLSITTPGTFEGAALLIITEVVTTQDGTSTNHVVADNVEAYAQGRP
IFAYAGDDFLTAASGHDLIVFSQPIGHDLLYNFDVRADQIDLIGFSATDFGAVQAHMLDD
VSGSAVIALGDEQSITLPGISSSSLTASNFVFDLAPAFSNVGTMSVSDGALLPISGEMNN
TGTVLVSAAGDETIVQLIQPGLTLKGGGQFLLSDDNSNIISGTSPNVTLNNENNVISGAG
QLGNGQLNFINAGNVNATGNQPLIIDTGSNVIHNAGILEASGPGGLIVVSAVDNSGFLWA
NTANLTVKGAVSGNGTAIIDGPGLLEFEAASNANVVFGLASGGTLSLGDAFHFNGTISGF
NDLDIIELNNFNPDSATISYVQNANTGGTLTIANGAQVAHLTLLGDYTADSFNLVSDLPG
HALVTYAHQGIIS
NT seq
5442 nt
NT seq
+upstream
nt +downstream
nt
ttgaattacacgggcgattttgacgccgcgcggcctgctgtagatggccagggctctcat
cccctggcctcgagtcacggggattcgtttgccgtacaggctcacggacacgcgcccgac
ggcgcactcctcgtacctgatcccaatctgttgtttcacggcgagtacaagcgtgctggc
gtcgacctcgtcctatctaatgatgggcgggagttcgtcgtccatgactatttcaagggt
gagaagcgcgcagcgctttcttcgcccgacggcgcgcatctcagcggagatcttgtcaac
gcgctcgccggccacgttcagtatgctcaggcggcgcccagcacagcgacatcccagatt
attggccacgtaacgaagctggcggggaatgccaccgcgatccgcaacggcgtatcaatc
atcctgaataatggcgacgacgtccagaagggcgacgtgctggtaaccggttcggattcg
accctcggcgtcaccttcatcgacggcacagtgttcggcctgtcctcaaacgcgaggatg
gtgttgaacgagatgatctacgaccccaatgggtcgaacaacgcgtcgctgctcagcttg
attgcgggcacaatcagcttcgtcgccggtgagaccgctaagcacggcgacatgaagatc
gatactccggtcgctaccatgggtatccgtggaacggccgtgctcacccagataagtttc
ttcgtgccgcttggcggtggagatccgcagcctcacgccaattttcaggttctggtcgag
cccgacggcaccactggctcctacgtcttgttcgacaagatcacactgctcccgatcggg
acagtcaaccaagctggacagatgatccagatcagcggcggtaatgtctcggtctccaat
gcattattgtcgccggaggttcagaagctcatctccgatgtgttctcgctgaagttcagc
gcgaattcggacaacaccaggctcaccacgaatttcaccgacacggtcacccccgacagc
cgtggtctggcgatgaacggtgcaggcggcctagccggtatcccgaactttaactttacg
atagcacccgagaaaacggctgtattcaatcaaacgggcgatctgttcattccgtttatc
tcaatcaaatctgtcgatgtgatttctgcttcagataaagcgagtttcacaattgcagat
caggtcatcatcaccgattccaatcctgctgacgttcttgttccatatgtaccaggaacc
gccacgatcaaatcggtgagcgggccttcgaccgccccaccaggtgccgatctggcaaag
cttttaactctcaatgccgcgactggcgcaatcagctacgatcccgcaaagtttgccttt
cttggcgccaatcagaatgtcgtagtcatactcgaatttgatagcagagcggggtccgaa
atcttccataaagctctgtctctaaccatcaccgggagcaacgatccggcgacgatcttg
ggaacggctaccggcacggtgatggaagacggcgggctgacggcgcacggcgttctgatg
gtccatgacgtcgataccgggcaagataacttccagacggcggcttcactcgccggggcc
tatggcaccttcacgttcgatccaaccaccggcgaatggagctatacgctcgataacact
gccgccaaggtccgggcgctcgccgacggccaagttgtccacgacacactgaccgtgaag
tcggccgacggcactgcttcgcaactgatcgacatcactatcaccgggagtaacgatgcg
gccgtgatttcgggaacggggatcggcgccgtcaaggaagactacaagctgactgcgtgt
ggcactctgacggtccatgacgccgataccggcgaggatcacttccagacgccagctacc
ctcgccggggcctacggtaccttcacgttcaatcctgccaccggcgactggagctacacg
ctcgacaactctgccgccaaagttcaggggcttgccggcggccaggtcgtacatgacact
ttgaccgtgaagtcggccgacggcaccgcttcacagctgatcgacgtcaccatcaccggc
agcaacgatgcggcggcaatctcgggagcggtgaccggcgcggtcgaggaagacggcaag
ctgactgcgtgtggcaccctgacagtccaggacgccgataccggccaggactacttccag
actccagcctcgctcgccgggacctacggcgccttcacgttcgatcccgccaccggcgac
tggagctattcgctcgataactctgccgccaaagtccaggcgcttgctggtggcgagatc
atccatcaaactttgaccgtgaagtcggccgacggcaccgcttcacagctgatcgacgtc
accatcaccggcagcaacgatgcggcggcaatctcgggagcggtgaccggcgcggtcaag
gaagacggcaagctgactgcgtgtggcactctgacggtccaggacgccgataccgggcag
gataacttccagacgcccgcttctctcgccgggacctacggcaccttcacattcgatccc
gccaccggcgaatggagctacacgctcgataactctgccgccaaagtccaggcgcttgct
ggtggcgagatcgtccatgacactttgactgtgatgtcggccgacggcaccgcttcacag
ctgatcgacgtcaccatcaccggcagcaacgatgccgcggtgatctcgggaacagcgact
ggcgcagtcaaggaagacggcagactaactgcgtgcggcacgctcaaggtccaggacatc
gacaccgggcaagaccacttccagacgccagcctccctcgccgcagcttacggcacgttc
acgttcgaccctgccagcggcgaatggagctacacgctcgataactccgcccccaaggtc
caggcgcttgctggcggccaggtcgtccacgacaccctgaccgtgaagtcggctgacggc
atcgcttcgcagctgatcgacgtgactatcgccggcagcaacgatgccgccgtgatctcg
ggaacagctattggcacggtgaaggaagacggcaagctaagtgcgtgcggcatgctcacg
gtccaggaccttgataccgggcaggatcacttccagacgcccgcttctctcgccgggacc
tacggcgccttcacgttcgatccggccaccggcgattggagctacacgctcgataactct
gccgccaaagtccaggcgcttgccggtggccagatcgtccatgatactttgaccgtgaag
tcggccgacggcaccgcttcgcagctgatcgacgtcaccatcaccggcagcgacgatgcg
gcggcaatctcgggagcggccatcggcgcggtcgaggaagacggcaagctgactgcgtgt
ggcacgctgacagtccaggacgccgataccgggcaggatcacttccagataccaggctcc
ccggccgggacctacggcactttcacgttcgatcctgccaccggcgattggggctacacg
ctcgataactctgccgccaaagtccaggggcttgtcggtggccaggtcgtccatgacacc
ctcactgtgaagtcggccgacggcactgcttcggagctgatcgacgtcaccatcaccggt
aagaacgatgccgcgataatctcgggtaagctgagcggcaatgtggagattcccgatgac
ggcccgggtagcggcaagttaaccgatactggcaaggtaaccgacaccgacatcgacaat
aatcccaacaccttcataccgaagcctgctgggtcggccactagccacggctacggcact
tatcaactgaccgcgtcgggcatttggacctatacgctcgattattcaaacccgaccgta
cataggctcgatgaaggccaacatctcaacgacaccttcacagttcagaccattgatggc
actgccaaggtcgtgacgactacaatcagcgatgatgatccgccgcatcgagctccggct
ggcgtcgctggctccgaaatcaatctcggcttagccgacccgttcttgcaatctggcgcc
atagtcactgtcacactcgccggcgttgcggacgactggatcgtaaccgatgaagttcga
agcgctgatggtacttggtcggtgcaaacagccgatcctgcatctctgtcgataacaacg
ccgggtactttcgaaggcgccgcgcttctaataataactgaagtagtgaccacgcaggac
ggtacaagtacaaaccacgtcgtcgctgacaatgttgaagcctacgcccaaggaaggcca
atcttcgcttatgcaggcgacgatttccttacggcggcgagcggtcatgacttgatcgtg
ttctcgcaacccattggtcatgacctcctttacaatttcgatgttcgtgccgatcaaatc
gatctgatcggcttttccgccaccgacttcggcgccgttcaagcgcacatgctggacgat
gtctccggcagcgccgtcattgcgctgggtgatgagcaatctattacgctaccgggcatc
tcatcgtcttcgctaacggcaagcaatttcgttttcgatctggcaccagcgttcagcaat
gttggcacgatgtcagtttctgacggagccttactcccgatcagcggagaaatgaacaat
accggcaccgtcctagtaagcgcggcaggcgacgaaaccatcgtgcagctcattcaaccc
ggattgacgcttaaggggggcgggcaatttttactctcggatgataacagcaacatcatt
tcgggaacgagcccgaatgtcaccctgaacaacgaaaacaacgtcatctccggtgcaggt
caattgggcaacggacaactgaacttcatcaacgccggcaacgtcaacgcgacaggcaac
caaccgcttatcatcgacactggctcgaatgtgatccacaacgcgggaattttggaggct
tctggaccaggaggcctgatcgttgtcagcgcagtcgacaattcgggcttcctctgggcg
aatactgccaatctgacggtcaaaggtgccgttagcggaaacggcacagcgattatcgat
ggcccaggcctgcttgagttcgaggccgcttcaaacgccaacgtggtttttggcctggct
agtggcggcaccctgtcgctcggagatgccttccatttcaacggtacgatttcagggttc
aacgatttggacattatcgagttgaacaacttcaaccccgattcagccactatcagttac
gtccagaatgcgaacaccggcggcacgctaaccatcgcaaacggagcacaagtcgctcac
ctgactcttcttggcgattacactgcggactctttcaatcttgtttccgatttaccgggc
cacgcactggtgacgtacgcccaccaagggatcatctcataa
DBGET
integrated database retrieval system
