Bradyrhizobium canariense: BcanWSM471_12120
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Entry
BcanWSM471_12120 CDS
T08760
Name
(GenBank) HAMP domain-containing protein
Organism
bcan
Bradyrhizobium canariense
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAMP
HAMP_2
Response_reg
HATPase_c
HisKA
GAF_2
WXG100_2
OKR_DC_1_N
OmpH
RNase_Y_N
YscO-like
HmpF
FBF1
IFT57
ATG14
YjdP
PII1_coiled_coil
FUT8_N_cat
Motif
Other DBs
NCBI-ProteinID:
UFW43766
LinkDB
All DBs
Position
complement(2669979..2676266)
Genome browser
AA seq
2095 aa
AA seq
DB search
MSDLDPGSASRSGRRIPKPKTNGMSEPDSRAELLLALQAMRNGDFSVRMSGDYLGIDGKL
ADTFNDIIAANQRMAQQLELVGQVVGREGKTRQRVKFGLASGSWADMEGSVNTLIDDLLW
PTREVTRAVAAVAQGDLLQTVKLDVDGRPLRGEFLQSATIVNTMIKQLGVFTSEVTRVAR
EVGTEGKLGGQAQVPEVTGVWKDLTESVNSMANNLTNQVRNIAEVTIAVANGDLSKKITV
DVRGEILQLKEAINTMVDQLRSFASEVTRVAREVGTDGKLGGQAIVPGVAGTWKDLTDSV
NAMCGNLTAQVRNIANVTTAVARGDLSRKITVDVRGEILELKDTINTMVDQLNSFASEVT
RVAREVGTEGKLGGQAQVPGVAGTWKDLTDNVNFMASNLTAQVRNIADVATAIASGDLSK
KITVNVSGEILQLKETLNTMVDQLNAFAGEVTRVAREVGTEGRLGGQANVLGVAGTWKDL
TESVNSMASNLTAQVRNIAEVTTAVAGGDLSKKITVDVRGEILELKDTINTMVDQLNAFA
GEVTRVAREVGTEGKLGGQAQVRGVAGTWKDLTDSVNSMASNLTGQVRNIAEVATAVAKG
DLSKKITVNVSGEILQLKETLNTMVDQLNAFAGEVTRVAREVGTEGKLGGQAEVPGVAGT
WKDLTDSVNSMAGNLTAQVRNIAEVATAIAGGDLSRKITVDVRGEILQLKDTLNTMVDQL
NRFAGEVTRVAREVGTEGRLGGQANVPGVAGTWKDLTDSVNSMAGNLTAQVRNIAEVTTA
VARGDLSRKITVDVRGEILELKNTINTMVDQLNGFAGEVTRVAREVGTEGKLGGQAEVPG
VAGTWKDLTDNVNFMASNLTAQVRNIAEVATAIAGGDLSKKITVDVRGEILLLKDTLNTM
VEQLRSFAAEVTRVAREVGTEGRLGGQAVVPGVGGTWKDLTDNVNLLAANLTTQVRNIAE
VTTAVARGDLSRKITVDVKGEILELKNTINTMVDQLNAFAGEVTRVAREVGTEGELGGQA
QVPGVAGTWKDLTDTVNFMAANLTEQVRGIVKVVTAVANGDLKQNLTVKSKGEVAALADT
INNMTETLATFADQVTSVAREVGVEGRLGGQADVPGAAGTWKDLTGNVNLLAANLTSQVR
AIAEVATAVTKGDLTRSIQVDARGEVAELKDNINTMITNLRLTTDVNTEQDWLKTNLAKF
TNMLQGQRDLTTVGRLLLTELSPLVNAHTGVIYQVENEDSPRLLLLASYAGDGVYPYPRV
LPFGDGLIGQCALDRRPRVIADIPADVVPINSALLRVAPKNLVVLPVLFEGQVKAVIELA
SLTSFTTSQMTFLEQLTDSIGIVLNSIEATMQTEGLLKQSQQLAGELQTQQRELQQTNDQ
LEQKAQQLAERNVEVERKNQEIEQARRALEEKATELALTSKYKSEFLANMSHELRTPLNS
ILILGQQLTDNPDGNLTGKQVEFARTIHGAGTDLLNLISDILDLSKIESGTVTVDAEEIL
TANLLETVGRPFRHEAENRNLSFKIDVDPNLARSLVTDSKRLQQVLKNLLSNAFKFTAEG
EVRLKVAAAVGGWGTDHPVLNSAPAVIAFEVSDTGIGIPLEKQKLIFEAFQQADAGTSRK
YGGTGLGLAISRELASLLGGEIHLRSLPGKGSCFTLYLPLKYSGPTLAPRAAPQQSQPPA
LQPATAEPQRVIEQLPDDRLNLEPGDSILLIVEDDPHYARVLVDLARDKGFKVLVAARGA
EALELAKQYQPRAVSLDVFLPDMLGWTVLSQLKHNPLTRHIPVQIITLDEDRQHALARGA
FSFVNKPTTTEGVSAALTQIKEYARPRRKRLLIVEDNEAEQLSIRELLHHDDIEIVATGT
GADALSMLRENPCDCVVLDLRLPDMTGFEVLDQIRNDDALSNVPVVVFTGRELSAEEDAE
LHTMARSIVVKGVESPERLLDETALFLHRVITELPVEKQRMLEKLNSSDEDLIGKTALLV
DDDARNIFALSSVLERRGMKVLTATTGNEAVTLVESNPEIAIVLMDIMMPQMDGYQTIGV
IRENPTFARLPIIALTAKAMKGDREKCLEAGASDYLAKPVNTDQLLLAIRMWLHR
NT seq
6288 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacctcgatcccggatctgcatcacgttccggtcgtcgcattccaaagccaaag
accaacggcatgtcggagccggattcccgggcagaattgctgctcgccctgcaggccatg
cgcaacggcgatttctcggtgcgcatgagcggcgactatctcggcatcgacggcaagctc
gccgacactttcaacgacatcatcgccgccaatcagcgcatggcgcagcagctcgagctg
gtcggccaggtcgtgggccgcgagggcaagacgcgccagcgcgtgaagtttgggctggcc
tccggctcctgggccgacatggaaggctcggtcaacacgctgatcgacgatttgctgtgg
ccgacgcgcgaggtgacgcgagcggtcgcggccgtggcacagggcgacctgctccagacc
gtcaagctcgacgtcgatggacgtcccctgcgcggcgaattcctgcagtcggcgaccatc
gtcaacaccatgatcaagcagctcggcgtgttcacctccgaggtgacgcgcgtggcgcgc
gaggtcggcaccgaaggcaagctcggcggccaggcccaggtgcctgaggtgaccggcgtc
tggaaggatctgaccgagagcgtcaactcgatggcgaacaacttgaccaaccaggttcgc
aacatcgccgaggtgacgatcgcagttgcgaacggcgacctctcgaagaagatcacggtc
gacgtccgcggcgagatccttcagctcaaggaagccatcaacacgatggtggaccagctc
cgctcctttgcctcggaagtgacgcgcgtggcgcgcgaggtcggcaccgacggcaagctt
ggcggccaggccatcgtgcccggcgtcgccggaacctggaaggatctcaccgacagcgtc
aacgcgatgtgcggcaacctcaccgcacaggtgcgcaacatcgccaacgtcaccaccgcc
gtggcgcgcggcgacctgtcgcgcaagatcacggtggacgtgcgcggcgaaatcctggag
ctgaaggacaccatcaacactatggtggaccagctcaactcgttcgcctcggaagtgacg
cgcgtggcgcgcgaggtcggcaccgaaggcaagctcggcggccaggcccaggtgccgggc
gtcgccggtacctggaaggacctcaccgacaacgtcaacttcatggcgtcgaacctcacc
gcgcaggtccgcaacatcgccgatgttgccaccgccatcgcgagcggcgacctctcgaag
aagatcacggtgaacgtctcgggcgaaatccttcaattgaaggaaacgctcaacaccatg
gtcgatcagctcaacgcctttgccggcgaagtcacgcgcgtcgcgcgcgaggtcggcacc
gagggccggctcggcggccaggccaacgtgctcggcgtcgccggcacctggaaggacttg
accgagagcgtcaactcgatggcctcgaacctcaccgcgcaggtccgtaacatcgcggag
gtgacgaccgcggtcgccggcggcgatctgtcgaaaaagatcaccgtcgatgtccgcggc
gaaatcctggagctgaaagacaccatcaacaccatggtggaccagctcaacgcctttgcc
ggcgaagtcacgcgcgtggcccgcgaggtcggcaccgaaggcaagctcggcggccaggcc
caggtgcgcggcgtcgccggcacctggaaggatctcaccgacagcgtcaactcgatggcc
tcgaacctgaccggccaggtccgcaacatcgccgaagtcgcgaccgcggtggccaagggc
gatttgtcgaagaagatcaccgtcaacgtgtcaggcgaaatccttcagctgaaggaaacg
ctcaacaccatggtggaccagctcaacgccttcgccggcgaagtcacgcgcgtcgcgcgc
gaagtcggcaccgaaggcaagctcggcggccaggccgaagtgcccggcgtggccggcacg
tggaaagacctcaccgacagcgtcaactcgatggcgggcaacctcaccgcccaggtccgc
aacatcgccgaagtcgcgaccgcgatcgccggtggcgatctgtcccgcaagattaccgtc
gacgtgcgcggcgagatccttcagctcaaggacacgctgaacacgatggtcgaccagctc
aaccgcttcgcgggcgaggtgacgcgcgtggcgcgcgaggtcggcaccgaaggccgcctc
ggcggccaggccaacgtgcccggcgtggccggcacctggaaggacctcaccgacagcgtc
aactcgatggcgggcaacctcaccgcccaggtccgcaacatcgccgaagtgaccacggcc
gtggcgcgcggcgacctctcgcgcaagatcaccgtcgacgtccgtggcgagattttggag
ctgaagaataccatcaacaccatggtggaccagctcaacggcttcgccggtgaagtgacg
cgcgtcgcgcgcgaggtcggcaccgaaggcaagctcggcggccaggccgaggtgcccggc
gttgccggcacctggaaggatctcaccgacaacgtcaacttcatggcctcgaacctcacg
gcgcaggtccgcaacatcgccgaggtcgcgaccgcgatcgccggcggcgacctgtcgaag
aagatcacggtggacgtgcgtggcgagattctgctgctcaaggacaccttgaacaccatg
gtcgagcaactccgctccttcgccgcggaagtgacgcgcgtcgcgcgcgaagtcggcacc
gagggccggctcggcggccaggccgtcgtgcccggcgtcggcggcacctggaaggacctc
accgacaacgtcaacctgctggccgcgaacctcaccacccaggtccgcaacatcgccgaa
gtcaccaccgccgtcgcgcgcggcgacctgtcgcgcaagatcaccgtcgacgtgaagggc
gaaatcctcgagctcaagaacaccatcaacaccatggtggaccagctcaatgcgttcgcc
ggcgaagtgacgcgcgttgcccgcgaggtcggcaccgaaggcgaactcggcggccaggcc
caggtgcccggcgtcgccggcacctggaaggacctcaccgacaccgtcaacttcatggcg
gcgaacctgaccgagcaggtccgcggcatcgtcaaggtggtgaccgcggtcgccaacggc
gacctcaagcagaacctcacagtgaaatcgaagggcgaggtcgcggcgctcgccgacacc
atcaacaatatgaccgagacgctcgcgaccttcgccgaccaggtgacgtcggtggcgcgc
gaggtcggcgtcgagggccggctcggcggtcaggccgacgtgcccggcgccgcgggcacc
tggaaggatctcaccggcaacgtcaatttgctggcagccaacctcacctcgcaggtgcgc
gcgatcgcggaagtggcgaccgccgtgaccaagggtgacctgacgcgatcgatccaggtc
gacgcccgcggagaggtcgcggagctgaaagacaacatcaacacgatgatcacgaacctc
cgtcttacgacggacgtgaacaccgaacaggactggctgaagaccaatctggcaaaattc
accaacatgcttcagggccagcgcgacctcaccaccgttggtcgcctgctgttgaccgaa
ttgtcgccgctggtgaacgcacataccggcgtgatctatcaggtcgagaacgaagacagt
ccgcggctcctgctgcttgcctcctatgccggtgacggagtctatccgtatccgcgcgtg
ctaccattcggcgacggcctgatcggccaatgcgcgctcgaccggcgcccacgcgtgatt
gcggacattccggccgacgtggtgccgatcaattcggcgctgcttcgcgtcgcgccgaag
aacctcgtggtgctgccggtgctgttcgaaggccaggtcaaggcggtcatcgagctcgcc
tcgctcacctccttcacgacctcgcagatgaccttcctggagcagctcacggactcgatc
ggcatcgtgctcaactcgatcgaggcgacgatgcagaccgaaggcctgctcaagcagtcg
cagcagctcgccggcgagctccagacccagcagcgcgaactgcagcagaccaacgaccag
ctcgaacagaaggcgcagcagctcgccgagcgcaacgtcgaagtcgagcgcaagaaccag
gagatcgagcaggcccgccgcgcactggaggaaaaggcaaccgagctcgcgctgacctcg
aagtacaagtccgaattcctggccaatatgagccacgagctgcgcacgccgctgaactcg
atcctgatcctcggccagcagctcaccgacaacccggacggcaatcttaccggcaagcag
gtcgaattcgcccgcaccatccatggcgccggcaccgacctgctcaatctcatcagcgac
attctcgatctctccaagatcgagtccggtacggtgacggtcgacgccgaggaaatcctg
accgcgaacctgctcgagacggtcgggcggccgttccgtcacgaggcggagaaccgcaat
ttgtcgttcaagatcgacgtcgatccgaatctcgcgcgcagcctcgtcaccgactccaag
cgcctgcagcaggttttgaagaacctgctctccaacgccttcaagttcaccgccgagggc
gaagtgcgccttaaggtggccgccgcagtcggcggctggggcacggatcatcccgtgctg
aactcggcgccggccgtgatcgcattcgaagtgtccgacaccggcatcggcattcccctg
gagaagcagaagctgatcttcgaggcgttccagcaagcggatgccggcaccagccgcaaa
tatggcggcaccggcctcggccttgcgatcagccgtgagctcgcaagcctgctcggcggc
gagatccacctgcgcagcttgccaggcaaggggtcgtgcttcacgctttacctgccgctg
aaatattccggcccgacgctcgcgccccgcgcggcgccccaacagagccagccgccggcg
ctgcagcccgctacagccgaaccgcagcgcgttatcgagcagcttcccgacgaccggctc
aacctcgaacccggcgacagcatcctcctgatcgtcgaggacgacccgcactatgcgcgc
gtgctggtcgacctcgcgcgcgacaagggattcaaggtgctggtcgccgcccgcggcgca
gaggcgctggaacttgcaaagcagtaccagccgagggccgtctcgctcgacgtattcctg
ccggatatgctcggctggactgtgctgagccagctcaagcacaatccgctgacccgccac
atccccgtgcagatcatcacgctcgacgaggaccgccagcatgcgctggcgcgcggcgcc
ttctccttcgtcaacaagccgacgacgaccgagggtgtctcggccgcgctgacgcagatc
aaggaatatgcgcggccacggcgcaagcggctgctgatcgtcgaggacaacgaggccgag
caactctcgatccgtgagctcctgcaccacgacgacatcgagatcgtggcgaccggcacc
ggtgccgacgcgctctcgatgctgcgtgagaacccctgtgattgcgtcgtgctcgacctg
cgcctgcccgacatgaccggcttcgaggtgctggaccagatccggaacgatgacgcgcta
tcgaatgttccggtcgtcgtcttcaccggccgcgagctgtcggccgaggaagatgcggaa
ctccacaccatggcgcggagcatcgtggtcaagggcgtggaatcgccggagcgcctgctt
gacgagaccgcgctgttcctgcaccgcgtgatcacggaattgccggtcgagaaacagcgc
atgctcgagaagctgaacagttccgacgaggacctgatcggcaagaccgccctgctcgtc
gacgacgacgcccgcaacatcttcgcgctgtcgagcgtgctggagcggcgcggcatgaag
gtgctgacggccacgaccgggaacgaggcggtgaccctggtcgaatccaacccggagatc
gccatcgtgctgatggacattatgatgccgcagatggatgggtatcagacgatcggcgtc
attcgtgaaaatccgaccttcgcccgtctcccgatcatcgcgttgacggccaaggccatg
aagggcgaccgcgagaaatgcctcgaggccggcgcgtcggactacctcgccaaacccgtc
aacaccgatcaattgctgcttgcaatccgcatgtggctgcaccgctga
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