Bradyrhizobium canariense: BcanWSM471_14375
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Entry
BcanWSM471_14375 CDS
T08760
Name
(GenBank) UdgX family uracil-DNA binding protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
bcan
Bradyrhizobium canariense
Pathway
bcan03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bcan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BcanWSM471_14375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcan03400
]
BcanWSM471_14375
Enzymes [BR:
bcan01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
BcanWSM471_14375
DNA repair and recombination proteins [BR:
bcan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BcanWSM471_14375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
Motif
Other DBs
NCBI-ProteinID:
UFW44192
LinkDB
All DBs
Position
complement(3179716..3181158)
Genome browser
AA seq
480 aa
AA seq
DB search
MQYITLESETDFDGWRKAARSLVLHQVKPADVTWAVEGGEAELFATPSPSPLPAAGDGTF
NVPAKFVELAKAAILHRDPERFAILYRLLFRLKNNHDLTEVATDADVAQVMAMAKAVYRD
EHKMHAFVRFREIGREREAHYVAWFEPEHHIVELAAPFFAKRFADMPWSILTPDLCAHWD
GHALSFTSGVSKSEAPSEDRLEETWRRYYTSIFNPARLKVKAMQTEMPKKYWRNLPEASI
IKPLIEDAERMTGAMIANAATNPHKPQKRPEAPMKRKIATDDLEALREEAAHCRACHLYK
DATQTVFGEGPKSANIMLVGEQPGDKEDLAGHPFVGPAGQMLDRALQEAGVDRKKVYVTN
AVKHFKFVPRGKIRLHQKPNTPEIKACRQWYEREVSVIQPDLIVAMGATAAQSVFGKITP
IGKNRGRLIDLPDGYKALVTVHPSYLLRLPDPEAKALEYQRFVEDLKIVAGLQKKAARAA
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgcagtacatcaccctcgagagcgaaaccgatttcgacggctggcgcaaagccgcgcgt
agcctcgtgcttcatcaggtgaaaccggccgatgtcacctgggccgtggagggtggcgaa
gcggagctgttcgcgacgccctcgccgtctccgctgccggcggctggcgacggcaccttc
aacgtgcctgcaaaattcgtcgagctcgccaaggccgcgatcctgcatcgcgatcccgag
cgtttcgcgatcctctatcgcctgctgtttcggctgaagaacaatcacgatctcaccgag
gtcgcgaccgatgccgatgtcgcgcaagtcatggccatggcaaaggcggtctaccgcgac
gagcacaagatgcatgccttcgtgcgcttccgcgagatcggcagggaacgtgaagcacac
tacgttgcgtggttcgagccggagcatcacatcgtcgagctcgccgcgccgttcttcgcc
aagcgctttgccgacatgccctggtcgatcctgacgccggatttgtgcgcgcattgggat
ggccacgcgctctcgttcacatcaggcgtcagcaagagcgaggcgccgagcgaagaccgg
ctggaggaaacctggcggcgctactacaccagcatcttcaatccggcccgccttaaagtg
aaggcgatgcaaacggagatgccgaagaaatattggaggaacctgcccgaggcttcgatc
attaagcctctgatcgaggatgccgagcgcatgaccggcgccatgatcgccaatgccgca
accaatccgcacaagcctcaaaagcggccggaggctccgatgaaacgcaagatcgctacc
gacgatctcgaagcgctccgcgaggaggccgcccactgccgcgcctgccatctctacaag
gacgccacccagaccgtgttcggcgagggtccgaagtccgccaatatcatgctggtcggc
gagcagcccggcgacaaggaagacctcgcgggccatcccttcgtcggtccggccggccag
atgctcgaccgggcactgcaagaggccggcgtcgaccgcaagaaggtctatgtcaccaac
gcggtgaaacacttcaaattcgtgccgcgcggcaaaatccgcctgcatcagaagccgaat
acgccggagataaaggcctgccgacagtggtatgagcgggaagtctccgtcatccagccc
gatctcatcgttgcgatgggcgcgaccgccgcgcagagcgtgttcggcaagatcaccccg
atcggaaagaaccgtggccggctcatagacctgcccgacggttacaaggcgctggtgacg
gtgcacccgtcctatctgctgcggctgcccgatccggaagccaaggcgctggaatatcag
cgctttgtcgaagacctgaagatcgtcgccggtttgcagaagaaagccgcgcgcgccgcc
tga
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