Bradyrhizobium canariense: BcanWSM471_17815
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Entry
BcanWSM471_17815 CDS
T08760
Symbol
lptF
Name
(GenBank) LPS export ABC transporter permease LptF
KO
K07091
lipopolysaccharide export system permease protein
Organism
bcan
Bradyrhizobium canariense
Pathway
bcan02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
bcan00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
BcanWSM471_17815 (lptF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bcan02000
]
BcanWSM471_17815 (lptF)
Transporters [BR:
bcan02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Lipopolysaccharide transporter
BcanWSM471_17815 (lptF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptF_LptG
DUF2099
Motif
Other DBs
NCBI-ProteinID:
UFW38116
LinkDB
All DBs
Position
complement(3900835..3902004)
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AA seq
389 aa
AA seq
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MGSIDRYIFRTTLASFALVLVSLTGVIWITQALRGIDLMTSQGQTILTFLGITSLVVPAL
VLIISPIALMIAISHTLNKLATDSEIIVMNAAGFSPFRLFYPFFYATCVVALLVAFIAAY
LAPDGMRRIKQWDAEITADVLTNILQPGRFAQLDKNLTIRIRERQPGGILAGIFIDDRRD
PNERVSIVAEHGEVVKNDNGSFLVLETGNLQRFEAGKRDPALVAFGRYGFDMSKFSGQGR
DVTLGIRERYLWELLSPSEDDPVYKQIPGQFRSALHDSLLAPIYPFAFAVLTFAFLGAPR
TTRQSRNFSIGSSILAVFGLRMAGFACSVMAVKSPGAVLVQYAMVIGAIGIGLAIIIGGL
VVEPPPRLMEAINRSNARIARLFGRPATA
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggggtcaatcgataggtatatcttccgcacgacgctcgcgtcgtttgcgctggtcctg
gtcagcctcacgggcgtgatctggattacgcaggcgttgcgcggcatcgacctgatgacg
agccagggtcagaccatcctgaccttcctcggcatcaccagcctcgtcgtgcccgcgctg
gtcctgatcatctcgccgatcgcgctgatgatcgcgatctcgcatacgctgaacaagctc
gcgaccgactccgagatcatcgtgatgaatgccgccggcttctcgccgttccggctgttc
tatccgttcttctacgccacctgcgtcgtggcgctgctggtcgccttcatcgcggcctat
ctcgctcccgacggcatgcggcggatcaagcagtgggacgccgagatcaccgccgacgtg
ctcaccaacatcctgcagcccggccgcttcgcccagctcgacaagaacttgacgatccgg
attcgcgaacgccagcccggcggcattctcgccggcatcttcatcgacgaccgccgcgat
ccgaacgagcgggtctcgatcgtcgccgagcacggcgaagtcgtgaagaacgacaacgga
tcgttcctggtgctcgagaccggcaatctccagcgcttcgaggccggcaagcgcgatccc
gcgctggtggcgttcggccgctacggcttcgacatgtcgaagttttcgggccagggccgc
gacgtcaccctcggaatccgcgagcgttatctctgggagctgctctcgccgtccgaggac
gatcccgtctacaagcagatccccggccagttccgctcggccctgcatgacagcctgttg
gcgccgatctatcccttcgcctttgccgtgctgaccttcgcgtttctgggtgcgcctcgc
accacgcgccagagccgcaatttctcgatcggctcatcgatcctcgcggtgttcggcctg
cgcatggccggcttcgcctgctcggtgatggcggtgaaatcgccgggcgcggtgctggtc
caatatgcgatggtcattggcgccatcggcatcgggctggcgatcatcattggcggcctt
gtggtcgaaccgccgccgcgcctcatggaggccatcaacaggtcgaacgcgcgcatcgcg
cggctgttcggacggccggccaccgcatga
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