Bradyrhizobium canariense: BcanWSM471_17840
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Entry
BcanWSM471_17840 CDS
T08760
Name
(GenBank) type I secretion system permease/ATPase
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
bcan
Bradyrhizobium canariense
Pathway
bcan02010
ABC transporters
bcan03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
bcan00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
BcanWSM471_17840
03070 Bacterial secretion system
BcanWSM471_17840
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bcan02000
]
BcanWSM471_17840
02044 Secretion system [BR:
bcan02044
]
BcanWSM471_17840
Transporters [BR:
bcan02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
BcanWSM471_17840
Secretion system [BR:
bcan02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
BcanWSM471_17840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
AAA_29
AAA_22
DUF87
ABC_ATPase
AAA_16
AAA_18
MeaB
Zeta_toxin
PRK
AAA_24
Motif
Other DBs
NCBI-ProteinID:
UFW38121
LinkDB
All DBs
Position
3908527..3910659
Genome browser
AA seq
710 aa
AA seq
DB search
MTTNAVSTDTGLDALLTLLHLQGVAADREQLRHRLGAASFGAADIVRCARSLGLKARIYR
TRWSRLSDTPLPAIAMLRDGGFMVIAKASADKVLVQSPEAQRPVLMDRDELSAIWDGGLI
LMVRRAGLSDLGRHFDITWFIGAIGKYRRLLSEVLAASFFLQLFALVSPLFFQVVIDKVL
VHRSLSTLDVLVIGLVVVSLFDTVLGILRNYLFAHTTNRIDVELGARLFHHLLALPMAWF
QARRVGDSVARVRELENIRNFITSSSLTLLIDLVFTSVFLAVMFAYSAQMSFIVLASFPF
YIAISAVATPLFRRRLDEKFRRGAENQAFLVESVSGIETLKAMAVEPQMQRRWEEQLAGY
VSASFGVTSLGNTASQLVQLVSKVVTAAILYVGARLVIGDALTVGELVAFNIFAGRVSAP
VLRLAQVWQDFHQARLSIARLGDILNSAAEPAYSAARAGLPPIRGNIRFEHVSFRYRPDG
AEILHDVSFDIPAGQTVGIVGSSGSGKSTFAKLVQRLYVPQSGRVLVDGMDLMTTDPAGL
RRQIGIVLQDNMLFNRSVRDNIALADPSLPMARIIDAAKLAGAHDFILELPEGYDTVVGE
RGSTLSGGQRQRIAIARALVGDPRILIFDEATSALDYESERIIHDNMKEIAKGRTVLIIA
HRLSTVRGADRIFTLERGRLVEDGTHDALIKTGGRYAALHRLQGGIYEVG
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgaatgcggtctccaccgacacggggctcgatgcgttgctgacgctgctgcat
ctgcaaggtgttgcggccgatcgcgagcagctaaggcaccggctgggcgcggcaagcttc
ggcgcagcggatatcgtccgctgcgcgaggtctctcgggcttaaagcccgaatctatcga
acgcggtggagccgtctgtcggacaccccgctgcctgcgatcgcaatgctgcgggacggc
ggcttcatggtcatcgcaaaggcctccgccgacaaggtgctggtgcagtccccggaggcg
cagcggccggtgctgatggatcgcgacgagctgagcgcgatctgggacggcggcttgatc
ctgatggtccggcgcgccggcctgtccgacctcgggcggcacttcgatatcacctggttc
atcggcgcgatcggcaaataccggcggctgctgagcgaagtgctggcggcttcgttcttc
ctccagctttttgcgctggtctcgccgctgttcttccaggtcgtcatcgacaaggtgctg
gtgcaccgctcgctgtccacgctcgacgtcctcgtcatcggcctcgtcgtcgtctccctg
ttcgacaccgtgctcgggatcctgcgcaattacctgtttgcgcacacgaccaaccgcatc
gatgtcgagctcggggcacgtctgtttcaccatctgctggcactgccgatggcctggttt
caggccaggcgcgtcggagattccgtggcccgggtccgtgagctcgagaacatccgcaat
ttcatcaccagctcgtcactgacgcttctcatcgacctggtcttcacctcggtgtttctg
gcggtgatgttcgcctattcggcgcagatgagcttcatcgtgctggcatcattcccgttc
tacatcgcgatctcggccgtggcgacgccgctgtttcgccgcaggctggacgagaaattc
cgccgtggcgccgagaaccaggccttcctggtcgagagcgtcagcggcatcgaaacgctg
aaggcaatggcggtcgagccgcagatgcagcgtcgctgggaagagcagctcgccggctat
gtttccgcaagcttcggtgtcaccagcctcggcaacacggcaagccagctcgtgcagctc
gtcagcaaggtcgtcaccgccgccattctctatgtcggcgccagactcgtgatcggtgac
gccttgaccgtcggcgagctcgtggccttcaacatcttcgcggggcgggtgtcggccccg
gtgctgcggctcgcgcaggtctggcaggattttcatcaggcgcgactgtcgatcgcgcgg
ctcggcgacatcctcaacagcgccgcggagccggcttactccgccgcccgtgcggggctg
ccgccgatccggggcaacatccgcttcgagcacgtgtctttccgctaccggcccgatggg
gcggagatcctgcacgatgtctcattcgatattccagccggacaaaccgtcggcatcgtc
ggatcgtccggctcgggcaaaagcaccttcgccaagctggtgcagcggctctacgttccg
caaagcggccgcgtgctggtcgacggaatggatctgatgacgaccgacccggccgggctc
cgtcggcagatcggaatcgtgctccaggacaacatgctgttcaaccgttcggtacgcgac
aacatcgcgctggccgatccaagcctgccgatggcccgcatcatcgacgcggcaaagctg
gcgggcgcgcatgatttcattctggagctccccgagggctacgatacggtggtcggcgag
cgcggctcgacgctctcgggcgggcagcgccagcgcatcgcgattgcccgcgcgctggta
ggcgatccccggatcctgatcttcgacgaagccaccagcgcgctcgactacgaaagcgag
cggatcatccatgacaacatgaaggagatcgcgaagggccgcactgtcctgatcatcgcg
caccgtctctccaccgtccgcggcgccgatcgcatcttcaccctggaacgcggccgtctg
gtcgaggacggcacgcatgatgcgctgatcaagaccggcggccgctatgccgccctgcat
cgtctccagggaggcatttatgaggtcggctag
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