Bradyrhizobium canariense: BcanWSM471_22795
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Entry
BcanWSM471_22795 CDS
T08760
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bcan
Bradyrhizobium canariense
Brite
KEGG Orthology (KO) [BR:
bcan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bcan03032
]
BcanWSM471_22795 (topA)
03400 DNA repair and recombination proteins [BR:
bcan03400
]
BcanWSM471_22795 (topA)
Enzymes [BR:
bcan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BcanWSM471_22795 (topA)
DNA replication proteins [BR:
bcan03032
]
Prokaryotic type
DNA Topoisomerases
BcanWSM471_22795 (topA)
DNA repair and recombination proteins [BR:
bcan03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BcanWSM471_22795 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
UFW39040
LinkDB
All DBs
Position
4924869..4927628
Genome browser
AA seq
919 aa
AA seq
DB search
MNIVIVESPAKAKTINKYLGSSYEVLASFGHVRDLPAKNGSVDPDANFKMIWEVDPKAAG
RLNDIAKSLKNADRLILATDPDREGEAISWHVLEVLKEKRAIKDHKIERVVFNAITKQAV
TDAMKHPRQIDGALVDAYMARRALDYLVGFTLSPVLWRKLPGARSAGRVQSVALRLVCDR
ELEIEKFVAREYWSLIATLLTPRGDAFEARLVGADGKKIQRLDIGTGAEAEDFKKALEAA
AYAVTAVDAKPARRNPQAPFTTSTLQQEASRKYGFAPAHTMRIAQRLYEGIDIGGETTGL
ITYMRTDGVQIDPSAITQARKVIGEDYGNAYVPDAPRQYQAKAKNAQEAHEAIRPTDMSR
RPDSMSRKLESDQARLYELIWKRTIASQMESAELERTTVDITAKVGGRTLDLRATGQVVK
FDGFLALYQEGRDDEEDEDSRRLPAMSPNDALKRQSLAVTQHFTEPPPRFSEASLVKRME
ELGIGRPSTYASILQVLKDRGYVKLEKKRLHGEDKGRVVVAFLESFFARYVEYDFTANLE
EQLDRISNNEISWQQVLKDFWTGFIGAVDEIKDLRVAQVLDVLDDMLGQHIYPARTDGGD
IRQCPSCGNGRLNLKAGKFGAFVGCSNYPECRYTRQLAADGEATADRSLGQDPDTGRDVW
VKAGRFGPYIQLGEQKDYAEGEKPRRAGIPKGTSPGDVELELALKLLSLPREIGKHPETG
EPITAGLGRFGPFVKHEKTYASLEAGDEVFDIGINRAVTLIAEKIAKGPSRRFGADPGKA
IGDHPTLGTVTVKGGRYGAYVTAGGVNATIPSDIEKDAITLPQAIALIDERAAKGGGKKP
KKAAKPAKAKKAAAKAADGDDAAPKTKKPAAKKAAKPKSESTSKARAAVSSTAKTSAIKT
SPTKAAGAKAPAKKSAGTK
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcgtcattgtggagtcgccggcgaaagccaagacgatcaacaagtatttgggc
tcgtcctacgaggttctggcctcgtttggccatgtccgcgacttgcccgcgaagaacggc
tccgtcgatcccgacgccaatttcaagatgatctgggaggtcgaccccaaggcggccggc
cggctcaacgacatcgccaagtccctcaagaacgccgatcgcctgattctcgccaccgac
cctgatcgcgagggcgaggccatctcctggcacgtgctggaggtcctgaaagagaagcgt
gcgatcaaggaccacaagatcgagcgcgtggtgttcaacgccatcaccaagcaggccgtc
acggacgccatgaagcatccgcgccagatcgatggtgcgctggtcgacgcctatatggcg
cggcgcgcgctggactatctggtcggcttcaccctctctcccgtgctgtggcgcaagctg
ccgggcgcccgctcggccggccgcgtgcagtcggtggcgctgcggctggtctgcgaccgc
gagctcgagatcgaaaagttcgttgcgcgcgaatactggtcgctgatcgcgaccctgctg
acgccgcgcggcgacgccttcgaggcacgtctggtcggcgccgacggcaagaagatccag
cgcctcgacatcggcaccggcgcggaagccgaggacttcaagaaggcgctggaagcagcc
gcctacgccgtgaccgcggtcgatgccaagccggcccggcgcaatccgcaggcgcccttc
acgacctcgacgctgcagcaggaagccagccgcaaatatggctttgcgccggcgcacacc
atgcgcatcgcgcagcggctctatgaaggcatcgacatcggcggcgagaccaccggactc
attacttatatgcgtaccgacggcgtgcagatcgatccgtccgcgatcacccaggcacgc
aaggtgatcggcgaggattacggcaacgcttacgtgccggacgcgccgcgccagtaccag
gccaaggccaagaacgcccaggaagcccacgaagcgatccggccgaccgacatgtcgcgc
cgccccgacagcatgagccgcaagctcgaatccgaccaggcgagactctatgaactgatc
tggaagcgcaccatcgcgagccagatggaatcggccgagctggaacgcaccacggtcgac
atcacggcgaaggtcggcggccgcacgctggacctgcgcgccaccggccaggtcgtcaag
ttcgacggcttcctcgcactttatcaggaaggccgcgacgacgaggaggacgaggactcc
cgccgcctgcccgcgatgagccccaacgacgcgctgaagcggcagtcgctcgccgtcacc
cagcacttcaccgagccgccgccacgcttctccgaggcctcgctggtcaagcgcatggaa
gagctcggcatcggccggccctcgacctatgcctcgatcctccaggtcctcaaggaccgc
ggctacgtcaagctcgagaagaagcgcctgcacggcgaggacaagggccgcgtcgtggtc
gcgttcctcgaaagcttctttgcccgctacgtcgaatacgacttcaccgccaatctggaa
gagcagctcgaccgcatctccaacaacgagatctcctggcagcaggtgctgaaggatttc
tggaccggcttcatcggcgccgtcgacgagatcaaggatctgcgcgtggcgcaggtgctc
gacgtgctcgacgacatgctgggacagcacatctatccggcgcgcaccgacggcggcgac
atcaggcaatgtccgagctgcggcaacgggcggctgaatctcaaggccggcaagttcggc
gccttcgtcggctgctcgaactatccggaatgccgctacacccgtcagctcgccgccgac
ggcgaggccacggctgaccgctcgctcggccaggaccctgatacggggcgcgatgtctgg
gtcaaggccggccggttcggcccctacatccagctcggcgagcagaaggattatgcggag
ggcgagaagccgaggcgcgcaggcattccgaaggggacgtcccctggagatgtcgagctc
gagcttgcgctcaagctgctgtcgctgccgcgcgagatcggcaagcatccggaaaccggt
gagcctatcaccgcgggtctcggccgcttcgggccgttcgtgaagcacgagaagacctat
gccagcctcgaggccggcgacgaagtgttcgacatcggcatcaaccgcgcggtgaccctg
atcgcggagaagatcgccaagggcccgagccgccgcttcggcgccgatcccggcaaagcg
atcggcgatcatcccaccctcggcaccgtcacggtgaagggcggccgctacggcgcctac
gtcacggccggcggcgtcaacgcgacgatcccgagcgacatcgagaaagacgccatcacg
ctgccgcaggcgatcgcgttgatcgacgagcgcgcggccaagggcggcggcaagaagccg
aagaaggcggctaagccggccaaggccaagaaggctgcggcgaaggccgccgacggcgat
gacgccgcgccaaaaaccaaaaagccggccgcgaagaaggcggccaaacccaaatccgaa
tccaccagcaaggcgcgcgccgccgtgtcgtcgacggccaagacttcggccatcaagacg
tcgccgaccaaggcagctggcgccaaagctccggccaagaaaagtgccggcaccaaatag
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