Bradyrhizobium canariense: BcanWSM471_26300
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Entry
BcanWSM471_26300 CDS
T08760
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
bcan
Bradyrhizobium canariense
Pathway
bcan00541
Biosynthesis of various nucleotide sugars
bcan01100
Metabolic pathways
bcan01250
Biosynthesis of nucleotide sugars
Module
bcan_M00064
ADP-L-glycero-D-manno-heptose biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
bcan00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
BcanWSM471_26300 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
bcan01005
]
BcanWSM471_26300 (rfaD)
Enzymes [BR:
bcan01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
BcanWSM471_26300 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
bcan01005
]
Core region
BcanWSM471_26300 (rfaD)
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
NAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
UFW39709
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All DBs
Position
complement(5609142..5610122)
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AA seq
326 aa
AA seq
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MLLVTGGAGFIGSNVVAALNEAGRSDVVVCDFLGNEGKWRNLAKRQLVDIVPPAELPDWL
KGRKLDAVIHLGAISATTATDGDLVFETNFRLSMRLLDWCTANAVPLIYASSAATYGDGE
AGFDDDSSVAALKKLRPMNLYGWSKHLFDLAVAERAANGERLPPQWAGLKFFNVFGPNEY
HKGSMMSVLARRFDDVKAGRVVQLFKSHREGIADGDQRRDFIYVDDVVRVIMWLLATPSV
SGLFNVGTGKARSFRDLMLAAYATLGASPNIEYIDMPEQIRGSYQYFTQSEVDRLHRAGY
NGGFMTLEDAVKAYVGDYLDRPDRFR
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgttgctggtgaccggcggggccggttttatcggatcgaatgtcgtcgccgcgctgaac
gaggccggccgcagcgacgtggtggtctgcgatttccttggcaacgagggcaaatggcgc
aacctcgccaagcggcagcttgtggatatcgtgccgccggctgagctgccggactggctg
aagggccgcaagctcgatgccgtgatccatctcggggcgatttccgcgaccaccgcgacc
gacggcgacctggtgttcgagaccaatttccgcctgtcgatgcgcctcctggactggtgc
acggcgaatgcggtgccgttgatctacgcctcttcggcggctacctatggcgacggcgag
gcaggatttgacgacgattcctcggtcgctgcgctgaagaaactgcggccgatgaatctc
tacggctggagcaagcacctgttcgatctcgccgtcgccgagcgcgcagcgaacggcgag
aggctgccgccgcaatgggccgggctgaaattcttcaacgtgttcggccccaacgaatac
cacaagggctcgatgatgagcgtgctggcacgccgcttcgacgacgtcaaagcgggccgc
gtcgtgcaattgttcaagtcgcatcgcgaaggcatcgccgatggcgaccagcgccgcgac
ttcatctatgtcgacgacgtcgtgcgcgtgatcatgtggctgctggcgacgccgtcggtg
tccgggctgttcaatgtcggcaccggcaaggcgcgcagcttcagggacctgatgctcgcg
gcctatgctacgctcggcgccagccccaacatcgaatacatcgacatgccggagcagatc
cgcggcagctaccagtacttcacccagagcgaggtcgatcgcctccaccgcgccggctac
aatggcggcttcatgacgctcgaggacgcggtgaaggcctatgtcggggattatctcgac
cggcccgaccgcttccgctga
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