Bradyrhizobium canariense: BcanWSM471_28380
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Entry
BcanWSM471_28380 CDS
T08760
Name
(GenBank) mechanosensitive ion channel
KO
K22044
moderate conductance mechanosensitive channel
Organism
bcan
Bradyrhizobium canariense
Brite
KEGG Orthology (KO) [BR:
bcan00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bcan02000
]
BcanWSM471_28380
Transporters [BR:
bcan02000
]
Other transporters
Pores ion channels [TC:
1
]
BcanWSM471_28380
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_TM1
MS_channel_2nd
MS_channel_1st
MS_channel_3rd
Motif
Other DBs
NCBI-ProteinID:
UFW40102
LinkDB
All DBs
Position
complement(6048118..6050448)
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AA seq
776 aa
AA seq
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MSHKLASAFLAALLIAISSLSSVRAAPPAPAANSAAALSPDEAKRALETLQDDKKRAQMI
DTLRAIATASGPQQPAAEPKSPIPLAADGLGAQLMLTVSEEIGEMSRDVADMARTLTHFP
AFYYWIVRTANDPAAYNLLIEIGWKLALVFGSAFCAEWVMFRLIRRPVVFLEGRMPQTAR
LPVQVLPIADPPSSVADVTPAPELHRRRHSLARAWQIMLRLPLVVGRFLLELLPVLVFVG
AATALLGTEIGESTTVRLVILAVVNAYAFSRGLICVVRVLAGPFGLFPVKAETAAYIEIW
ARRIVGVAVSGIAVANVALLLGLHRAGYAALLRMVMLVVHLFVVVIILQCRRQVAEAIRA
PADRQGIAAALRNRIAGGWHYLAIALDLALWAVWALNIRNGYSLLLQYFVGTIAVALITR
VAIMLTLGLIDRGFRIRPEILQRFPGLEIRANRYLPLLRKIVSGVIAFIGLVAVLEVWGV
DAIVWFYGGQIGSRLISAVVTIGIAVFSAAAIWEASNALLDRQINTLSRDGHYARAARLR
TFQPMLRTALLCVIATVVGLTALSEIGVNVAPLLAGAGIVGIAIGFGSQKLVQDLITGLF
LLLENTVQVGDSVSVSGLSGVVENVSIRTIRLRAGDGAVHIVPFSAVTTITNASRGAGNA
SVSVNVAYKEDTDRAGQILKDIVDEMRREVEFRSLIRGDLELWGIDKVDGAMVSIVGQIR
CTEAGRWPVQREFNRRMKQRFQHNGIEVASATQTILMHIAPPADSAAHLTPRRAAG
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgcataagcttgcctccgcgtttctcgccgcgctcctgatcgcgatctcatctctc
tccagcgtccgcgctgcgccgcctgcgccggcggccaatagcgctgccgcgttgtcgccc
gatgaggccaagcgcgcgctggagacgctgcaggacgacaagaagcgcgcgcagatgatc
gatacgctgcgcgcgatcgccactgcgtccggtccacagcagcccgcggccgagccaaaa
tcgccgatcccgctcgcggccgacggcctcggtgcgcagctcatgctcactgtgtccgag
gagatcggcgaaatgtcgcgagacgtcgccgatatggccaggacgctcacgcacttcccg
gcgttctactactggatcgtgcggaccgcgaacgatcccgcggcctacaatctcctgatc
gagattggttggaagctcgcgctggtgttcggctctgctttctgcgccgaatgggtgatg
ttccgtctgatccggcgccccgtcgtgttcctggaagggcgcatgccgcaaacggcgcgc
ctgccggtgcaggtgttgccgattgccgatccgccatcatcggtcgccgatgtcaccccc
gcgcccgaactgcacaggcgccgccacagcctggcgcgggcctggcaaatcatgctgcgg
ctgccccttgtggtgggaagattcctgctcgagctgcttcccgtgttggtctttgtcggc
gccgccacggcgctgctcggcaccgagatcggcgagtccaccaccgtccggctcgtgatc
ctcgcggtcgtcaacgcctatgcgttctcgcgcgggctcatctgtgtggtccgtgtgctg
gcgggaccgttcggcttgtttccggtcaaggccgaaaccgccgcctatatcgagatctgg
gcgcgccgcattgtcggtgtcgccgtctccggcatcgccgttgccaacgttgcgctgctg
ctcggcctgcatcgcgccggctatgccgcgctcttgcgcatggtgatgctggtcgttcat
ctcttcgtcgtcgtcatcatcctgcaatgccgccgccaggtcgccgaagccatccgcgcg
cccgccgaccggcaggggatcgcggcggcactgcgcaaccgcatcgcgggtggctggcac
tatctcgccatcgcgctcgacctcgctctgtgggccgtgtgggcgctgaacatccgcaac
ggatattcattgctgctgcaatatttcgtcggcaccatcgcggtggcgctgatcacgcgt
gtcgccatcatgctgacgctgggcctaatcgaccgcggcttccgcatcaggccggaaatc
ctccagcgctttccgggcctcgagatccgcgccaaccgctatctgccgctgctgcgcaag
atcgtatctggcgtgatcgcgttcatcggcttggtggccgtgctcgaagtctggggtgtc
gacgccatcgtctggttctatggcggccagatcggcagccggctgatctccgcggtggta
acgatcggcattgccgttttcagcgcggcggcgatctgggaagccagcaacgcgctgctg
gaccgtcagatcaatacgctgtcgcgcgacggccactacgcccgcgccgcgcggctgcgg
acctttcagccgatgctgcggacggccttgctgtgcgtgatcgccaccgtcgtcggcctc
acggcgctcagcgagatcggcgtcaacgtcgcgccgctgctggcgggcgccggcatcgtc
ggcatcgccatcggtttcggttcgcaaaaactggtgcaagacctcatcaccggcctgttc
ctgctgctggagaacaccgtccaggtcggcgacagcgtcagcgtgtccgggctatcaggc
gtagtcgagaacgtctcgatccgcacgatcaggctccgggccggcgacggtgccgtgcac
atcgtgccgttcagcgcggtcacgaccatcaccaatgccagccgcggcgccggcaatgcg
tccgtcagcgtcaacgtcgcctacaaggaagacaccgaccgcgccggccagatcctcaag
gacattgtcgacgagatgcgccgcgaggtggaattccgcagtctgatccgcggcgatctc
gagctctggggcatcgacaaggtcgacggcgccatggtgtcgatcgtcggccagatccgc
tgcaccgaggccggccgctggccggtgcagcgcgagttcaaccgccgcatgaagcagcgt
ttccagcacaacggcatcgaggtcgcatccgccacccagaccatcctgatgcacatcgcg
ccgccggcggacagcgcggctcatctgacgccgcgtcgagcggcaggttag
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