Bradyrhizobium canariense: BcanWSM471_32940
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Entry
BcanWSM471_32940 CDS
T08760
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
bcan
Bradyrhizobium canariense
Brite
KEGG Orthology (KO) [BR:
bcan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bcan03009
]
BcanWSM471_32940
Enzymes [BR:
bcan01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
BcanWSM471_32940
Ribosome biogenesis [BR:
bcan03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BcanWSM471_32940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S4
PseudoU_synth_2
S4_2
Motif
Other DBs
NCBI-ProteinID:
UFW40963
LinkDB
All DBs
Position
complement(7019985..7022153)
Genome browser
AA seq
722 aa
AA seq
DB search
MPRDSDKDNDSRGRRDRGPAKGGPAKGRSGKPRGPGKKFAKRGFEGKGDARPPRGDRDSR
PVRRREEGDAPRRDFSDRPKFNREDRPRQDRPREDRPRGEDRGERSFKPRGDRPFKPRED
RPFSDRPSRDGEKRPFKPRGDRPFSDRSSRDGEKRPFKPRGDRPSYGRDDRPPRRDRDES
RPAGRTGDAKFGDKRAYAPRGDRPERKFDGERKFSRGAPDRNRSERSDSNPWQKRDAAPR
GDRPPRKDFSKGPRKDFGGSDRGQDKPWQKREDRQGGGEDRPRFSRSRDDRPSGDRPFRE
RPKFDRPKFDRPRDDRPRFDRGGDRPKFDRPRERSEGRSDWHEHPRSEARSGDRPRRENE
DDSRIFEKRPAFGGRGAYRERDRDSERRPRREEEVKPKKAGERIAKVLSRAGLASRRDAE
EMVTQGRVSVNGRVINSPALDITSNDVVTIDGKPLPERERTRLFLYHKPRGLMTTHDDPE
GRPTVFDNLPEGLPRLISIGRLDFNTEGLLLLTNDGGLARTLELPDTGWLRRYRVRAHGE
VTQAQLDELKNGIEIEGVKYGPIDATLERDQGANVWLVFAIREGKNREVRNVCAHLGLEV
NRLIRVSYGPFQLGEVPEGQVEEIKSRVLRDQLGEKIIEKSGAQFDVPQKSASHEGDDAP
REKKPASKRGVINDRKGRRVLVQRTGSEEARERNEAEASGYGPPRRPKRGYHGKRDLAPK
ED
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgcgacagcgacaaagacaacgattcccgcggccggcgtgatcgcggcccggcc
aagggcggcccggccaagggccgctccggcaagccccgcgggcccggcaagaagttcgcc
aagcgcggcttcgagggcaagggcgatgcccgcccgccccgaggcgaccgcgacagccgt
ccggtccgccgccgcgaggagggtgatgcgccccgccgcgacttcagcgaccgcccgaag
ttcaatcgcgaagaccggccgcgccaagaccggccgcgcgaagaccggccgcgcggcgag
gatcgtggcgagcgcagcttcaagccgcgtggcgatcggcccttcaagccgcgtgaagac
cgtccgttttccgatcgtccgtcgcgcgacggcgagaagcggccgttcaagccgcgtggc
gaccgcccattttctgatcgctcctcgcgcgatggcgagaagcggccgttcaagccgcgc
ggtgatcgcccgtcctatgggcgtgatgaccgtccgccgcgcagggatcgcgacgagtcc
cgtccggccggccgaaccggtgacgcgaagtttggcgacaagcgagcttacgcgccgcgt
ggcgaccgtccggaacgcaagttcgacggcgagcggaagttttcgcgcggcgcaccggac
cgcaatcgcagcgagcgcagcgattcaaatccctggcagaagcgcgatgcggctccgcgc
ggcgaccggccgccgcgcaaggacttcagcaagggtccgcgcaaggattttggcggcagc
gaccgcggtcaggacaagccctggcagaagcgtgaggatcggcaaggcggcggcgaagac
cgtccgcgcttttcgcgttcgcgcgacgatcgtccatcgggtgatcgtccgttccgcgag
cggcccaaattcgatcggcccaagttcgatcgtccacgcgatgatcgtccgaggttcgat
cgcggcggcgaccgcccgaaattcgatcgtccgcgcgagcgctccgagggccgctccgac
tggcacgagcatccccgcagcgaagctcgctccggtgatcgtccacgccgcgaaaacgag
gatgacagcaggatcttcgagaagcgtccggccttcggtggccgcggcgcttatcgcgag
cgcgatcgtgattccgagcggcggccgcgccgcgaggaagaggtcaagccgaagaaagcc
ggcgagcgtatcgccaaggtgctgtcgcgcgcgggcctcgcctcgcgccgcgatgccgag
gagatggtcacgcagggccgcgtcagcgtcaacggccgggtgatcaattcgccggcgctc
gacatcacctcgaacgatgtcgtcaccatcgacggcaagccgttgccggagcgcgagcgc
acgcggctgttcctctatcacaagccgcgcggtctgatgacgacgcatgacgatcccgag
gggcgtccgaccgtgttcgacaatctgcccgaaggcctgccgcggctgatctcgatcggc
cggctcgacttcaacaccgaaggcctgctgctgctcaccaatgatggcgggctcgcgcgc
acgctcgagctgccggacaccggctggctgcgccgctaccgtgtccgcgcccatggcgag
gtcacgcaggcgcagctcgacgagctgaagaatggtatcgagatcgagggcgtcaaatat
ggtccgatcgacgccacgctggagcgtgaccagggcgccaatgtctggctggtgttcgcg
attcgggagggcaagaaccgcgaagtgcgcaacgtctgcgcccatctcggactcgaggtg
aaccggctgatccgggtgtcctacggcccgttccagctcggcgaggtccccgaaggtcag
gtcgaggagatcaagtcccgcgtgctgcgcgaccagctcggcgaaaagatcatcgagaaa
tcgggcgcgcagttcgacgtgccgcagaaatcggcctcgcatgagggggacgacgcgccg
cgcgagaagaagccggcgagcaagcgcggcgtgatcaatgaccgcaagggccgtcgcgta
ctggtgcaacgcaccggcagcgaggaagcgcgcgagcgtaacgaggctgaggcgagcggc
tacggtccgccgcgccgtcccaagcgcggctatcacggcaagcgcgatctggcgccgaag
gaggactga
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