Bacillus carboniphilus: LC087_00920
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Entry
LC087_00920 CDS
T09277
Symbol
yhaM
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
bcao
Bacillus carboniphilus
Brite
KEGG Orthology (KO) [BR:
bcao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcao03019
]
LC087_00920 (yhaM)
Messenger RNA biogenesis [BR:
bcao03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LC087_00920 (yhaM)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
WLR42837
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All DBs
Position
182684..183628
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AA seq
314 aa
AA seq
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MTVKGVRQFEVGEQVNLPLLVKSQSKGIASNGKPYLTLMLQDKSGEIEAKLWDASSSDEE
MYKPKSIVIVFGDIHHYKGRYQLKIRTIRVANTSDHISVGDLVETAPLAKDEMMETITQA
IFDMKNSTIQRMTRHLLKKHQSAFMEFPAATKNHHEFVSGLAYHVVSMLNLAKSICDLYP
SLNRDLLYSGVILHDLGKVIELSGPIATSYTIEGNLLGHISIMVNEIKEAAKELELENEE
EVMVLQHIVLSHHGKAEWGSPKPPMVKEAEILHYIDNIDAKMNMFDKELEHVKPGEFSDR
VFALDNRSFYKPNF
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgaccgttaaaggtgttaggcagtttgaagtaggagaacaagtaaaccttcctttacta
gtgaaatctcaatcaaaaggcattgctagcaatggaaagccatatttaacattaatgcta
caagataaatctggtgagattgaggcgaagctatgggatgcttcttcttctgatgaagaa
atgtataagccgaagagcattgttattgtctttggtgatattcatcattataaaggacga
tatcaattaaaaatacgtacaatccgagtggcaaacacttctgatcatatttctgttggt
gatttagtcgaaacagcaccattagccaaagatgaaatgatggagacgattactcaagct
atttttgatatgaaaaattcaacgatacaacgaatgacccgtcatttactgaaaaaacat
caatctgcttttatggaattcccagctgcaacgaaaaaccatcatgaatttgtttcggga
ttagcgtaccatgtggtttccatgcttaatttagctaaatcaatatgtgacttatatcct
tcgttaaatcgtgatttattatattcgggagtgattttgcacgacttaggaaaagttatt
gaactttcagggccaattgcgacttcgtatacgattgaaggaaatttgttgggccacatc
tctattatggtgaatgaaattaaagaggcagcaaaagagctagaactggaaaatgaggaa
gaagtgatggttctacagcatattgtcttatctcatcatggtaaagcagaatggggcagt
cctaagccacctatggtaaaggaagcagaaattcttcactatattgataacattgatgca
aaaatgaatatgtttgataaagagttagagcatgttaaacccggtgagttctccgaccgt
gtattcgctttagataaccgctctttttataaacctaatttttaa
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