Bacillus carboniphilus: LC087_01305
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Entry
LC087_01305 CDS
T09277
Name
(GenBank) SbcC/MukB-like Walker B domain-containing protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
bcao
Bacillus carboniphilus
Brite
KEGG Orthology (KO) [BR:
bcao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcao03400
]
LC087_01305
DNA repair and recombination proteins [BR:
bcao03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LC087_01305
Archaeal homologous recombinant proteins
LC087_01305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
SMC_N
AAA_29
ABC_tran
AAA_21
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
WLR42902
LinkDB
All DBs
Position
258250..261621
Genome browser
AA seq
1123 aa
AA seq
DB search
MKPIKLTIAGLHSFKEKQTIDFDQLCSGGVFGIFGPTGSGKSSILDAMTLALYGKVERAP
NNTQGIINHGEDQLSVSFSFQLQNGDVTKSYKIERLFKRTDEVKVKSSMCRLIEEGYEQV
VLADKTNEVNQKVQQLLGLTIDDFTRAVVLPQGKFAEFLSLKGTERRQMLQRIFNLEKYG
DLLNKKIKHRLSSDKAFYNELNAEKSGLGDASTEALTEARKKLALVEEELKKRMIEQNQL
EKEVEEAKEIWSLQIEHDQVQEKKNQLLQNQDQILLLKNQFQNALEAKQLEPYAQSVDQL
EKELAQVKQHHHDLAEQVEKMKIEYEEKQRLFEQARKYKAESEPKLLLKKERLHQWVKLE
KEVMNEEKGYLQLLKKEKSVKEQYTQLDQSEQSVGQTLDKALEKQQMLKQELQSKAVSNK
ERQLVQAAYHIKQQISQLAQKEEEWKQALQKKQKEMSQHKEQLEKMNNNIRYHHEKMTEG
FNRLSDLYSYFEDLKRDIESRLERLKEQKEQKKQWIETLHKKHAAYQIRHQLQEGNPCPV
CGSLEHPSPVEDMELDNQKEERELHQLEKWEQNLQDLSVVIEMERSKLQEQSDSLIEEFS
LRLSNPKENSNENNNILDDKQLKAEVTSLKQDALQLKQQLQTHVQEMRSISQKPGHIKEV
LDSFQKEMNDYQKKLEEIEKLIVMEKQSWVELNPSFAFHEVENMIKHHSERDQQMEKIQE
RIETSVQFIEDKQNQLKQYGKQKLTVAKQLSEIKATLQYYQKSIQDKKAQLPEIAQSESF
TKQLEKIDVELEKLTKEEQGCYLVWQDSSDQLKKTENQYVSIKDKNKDLKNRLLEANRAW
EDRQKDSRFDTLTEVFESVLSNDELKTIEKQMNEYEQQMNELNSHLFRLNERLNGRNLTQ
EEWERLQQRAILFRKKLDEAVEEKGAALRSVDDLLKKHERYQEIESKLIELQETITKYEQ
LQKVFKGNSFVEYVAEEQLMQVSRDATEHLRMLTRGRYAIEVDSQGGFLMRDDANGGVKR
PVSSLSGGETFLTSLALALSLSANIQLRGEYPLQFFFLDEGFGTLDADLLDTVVSALEKL
QSKNLSVGVISHVQELRSRLPRKLMVNPADPTGTGSTVQLEIM
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgaagcctattaagttaacgatagcaggattgcatagcttcaaggaaaaacaaaccatt
gatttcgatcagttatgtagcggaggcgtgttcgggatttttgggccaacaggtagtggg
aaatcttctatattagacgctatgacattggccttatatggaaaagttgaacgtgcccct
aataatacacaaggaattatcaatcatggggaagatcagctttctgtttccttctctttt
caattacaaaacggtgatgtgacgaagagctataaaattgaacggttgtttaaacggact
gatgaggtaaaagtaaaatcaagtatgtgtcgcttaatcgaggaagggtatgaacaagtt
gttcttgctgataaaacgaatgaagttaatcaaaaggtccaacaattattaggattgacg
atcgatgactttacgagagcggttgttttgccacaaggaaagttcgcagagtttctttct
ttaaagggaacagaaagaagacaaatgctgcaacgcatcttcaatttagaaaaatatggc
gatcttctcaataaaaaaattaaacatcgattatcctctgataaagctttctataacgaa
ctcaatgcagaaaaatctggattaggtgatgcttcaacagaggccttgacggaagcaaga
aaaaagttggctctagtggaagaagaattaaaaaagcgcatgatcgagcaaaatcagctt
gaaaaagaagttgaagaggcaaaggagatttggagcttacaaatagaacacgatcaagtg
caggaaaagaagaaccagttgttacagaatcaagatcaaatccttcttttaaaaaaccaa
tttcaaaatgcacttgaagcaaaacaattggagccttatgcgcaaagtgttgatcaatta
gaaaaagaattagcgcaagtgaaacagcatcatcacgatcttgcagagcaagtggagaaa
atgaaaatagagtacgaggagaagcagcgattatttgaacaggctagaaaatataaagct
gagagtgagccgaagcttttgttaaaaaaagaaaggctccatcaatgggtgaagcttgaa
aaagaggtaatgaatgaagagaaaggctacctgcagcttctcaaaaaagaaaaatcggta
aaagagcaatatactcagttagatcaatctgaacaatcagtgggacagacgctagataaa
gccttagaaaaacaacaaatgcttaagcaggaacttcaatcaaaagccgtatcgaataag
gaaagacaacttgtccaagcagcttatcacataaaacaacaaatatcacagcttgcgcaa
aaagaagaggaatggaaacaagctttacagaaaaagcaaaaggaaatgtctcagcataaa
gaacaactagaaaagatgaataacaatattcgttatcatcatgaaaagatgacagaaggt
tttaatcgattgagtgatttatatagttattttgaagatctgaaacgggatattgaatca
cgattggaacgtttaaaggagcagaaagagcagaagaaacaatggattgagactcttcat
aagaaacacgcagcgtatcaaattcgtcaccaacttcaagaaggaaatccttgtcctgtt
tgtggctctttagagcatcctagtccagtagaagatatggagcttgataatcaaaaagag
gaacgtgaacttcatcaattagagaagtgggaacaaaatttacaagatctttctgtcgtg
attgagatggagagatctaaattacaagagcaatcggattctttaattgaagaattttca
cttcggttgtctaatccgaaagaaaattcaaatgaaaataataatatcttagacgataaa
caattaaaagccgaagtaaccagtttaaaacaagatgctctccaattaaaacagcaactt
caaacgcatgttcaagaaatgcgttccatctcgcaaaaacctgggcacataaaggaagtg
ctcgatagtttccaaaaagagatgaatgattatcaaaaaaaattagaagaaattgaaaag
ctaatagtaatggagaagcaatcatgggttgagcttaatccatcttttgcatttcatgaa
gtagaaaacatgatcaagcatcattcagagcgtgatcagcagatggagaagattcaagaa
agaattgagacgagcgttcaatttatcgaggataaacaaaatcaactaaaacaatatggt
aaacaaaaactaactgtagcgaaacagctatctgaaatcaaggctaccctccagtattac
caaaaaagtattcaagataaaaaagctcaattacccgagatagctcaatctgaatccttt
acaaagcaacttgaaaaaatcgatgttgagcttgaaaagctaacgaaggaggagcaagga
tgttacttggtctggcaggatagttctgatcaactcaaaaaaacagaaaatcaatatgta
tcgatcaaggataaaaataaggacttaaaaaatcgtttactagaggcgaaccgagcgtgg
gaagaccgtcaaaaggattctcgctttgatacacttactgaagtattcgagtctgtctta
tcaaacgatgagttgaaaacaatagagaaacaaatgaatgaatatgagcaacaaatgaat
gaattaaattctcatttatttagattaaatgaacgtttaaatgggcgtaatttaacacaa
gaagaatgggaaagacttcagcagcgggcgattcttttcagaaagaaattagatgaagcg
gttgaagaaaaaggagcggctttgaggtcggtagatgatttactgaagaaacatgagcgt
tatcaagagatcgaaagtaagctcatcgaattacaagaaacgattacaaaatatgaacaa
ctacaaaaagtttttaaaggaaatagttttgttgaatatgtagcggaagagcagttgatg
caagttagccgagatgcaactgaacatcttagaatgttaaccagaggtcgatatgcgata
gaagttgattcgcaaggaggctttttaatgagggacgatgccaacggtggggttaaaaga
cccgtctcttctttatcaggaggagaaacgtttttaacttcattagcacttgctttgagt
ttatcggcgaatattcaattacgtggggaatacccattgcaatttttcttcttggatgaa
ggctttggcacgctagatgctgatttgttagacacggttgtttctgcacttgagaaactt
caatcaaaaaatttatctgttggcgttattagtcacgtgcaagaattaagatcgagactc
ccacgaaaattgatggtcaacccagcagacccgacaggaacaggttccacagtgcaactt
gaaataatgtaa
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