Bacillus carboniphilus: LC087_01780
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Entry
LC087_01780 CDS
T09277
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bcao
Bacillus carboniphilus
Pathway
bcao03420
Nucleotide excision repair
bcao03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bcao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LC087_01780
03430 Mismatch repair
LC087_01780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcao03400
]
LC087_01780
Enzymes [BR:
bcao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LC087_01780
DNA repair and recombination proteins [BR:
bcao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LC087_01780
MMR (mismatch excision repair)
Other MMR factors
LC087_01780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
DEAD
Motif
Other DBs
NCBI-ProteinID:
WLR42975
LinkDB
All DBs
Position
complement(346562..348772)
Genome browser
AA seq
736 aa
AA seq
DB search
MKKAIWKDRVIDLQTYSRESFQKLYEATKKGIVSCEHCKKPVQLYLGIEKQPYFHHLHDT
KCNGIEIEEHQIRDAHNSNGILLPKNKAINPSQVTFNWKLPKPIKNNTPFMSPPNYSEQS
FVVPLDPKQQQAVHTIDGPLLVLAGAGSGKTRVLTARCIYMALEKNIDPKSMMLVTFSTK
AAKEMKDRITSQLQTQPIIGTFHSIFYRILAHHLPTYRQTDQLIKWDWQKSYYFQPVLKR
LNIDEKDFPFDQALQQISLWKNTMKRPDEITPQTELEEQFQALYEHYERQKEYDQKFDFD
DMLLKCLQLFGENEKLLKKYQKRFHYFLVDEFQDINPVQYKLLQLLSKQTNNICAVGDDD
QSIYSFRGSEPSFILNFKKDYPNAKMVQLSHNYRSSHPIVTSANKVISFNKERFQKKIQA
VSPSTQYPFLFFPYDEEEEATMIVEDIKGKIQNGASPNDFAILYRTHTAGRAIFERFCES
SIPFEFENGQDSFYKKRVIRSLLSFFKISLNQDDTSALKDLFTALFIKQSHINELKALTI
LHDCPYIEALPKLPDLLPFQRKKLKALVKVIPTLTKKTPIQAIEVIEKELGFGDFIKKRG
QEGNKMDKGSDALQDFKVVAKKFSTIHELLDHVDHMTAKSQEKSLSYQDSVQLLTIHRSK
GLEFKTVYVIGVVDGSIPHDYALDSWRKGETLPLEEERRLLYVAMTRAKDQLYLSVPDNR
RTKSVKISRFIKTLAR
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaaagcaatatggaaagatcgagtaatcgatttacaaacctattctagagaatct
tttcaaaaactttatgaagctacaaaaaaggggattgtttcatgtgagcattgtaaaaaa
cccgttcaactatatttaggaattgaaaagcaaccttattttcaccatctacatgatact
aaatgtaatggcatagaaattgaagaacatcaaataagagacgctcataatagtaacggc
attcttttacctaaaaataaagctattaatccatcacaagtgacgtttaattggaaatta
ccaaagccaataaagaacaatacgccttttatgtcacctcctaattattcggaacaatcc
tttgttgttcctcttgatccaaaacaacaacaggctgtacatacaattgatggaccatta
ttagttcttgcaggtgcgggaagtggaaaaacgcgcgtactaactgctcgatgtatatat
atggccttagagaaaaatattgatcctaaaagtatgatgctcgtgacttttagcacaaaa
gcagctaaagaaatgaaagatcggataacgagtcaattacaaacacaaccgatcattggt
acatttcatagtattttttataggattttagcacaccatcttccaacatatagacaaacc
gaccaattaattaaatgggattggcagaaaagctattattttcaacctgtgctaaaaaga
ctgaacatagatgaaaaagatttcccttttgaccaagcattacagcaaattagtctttgg
aaaaacacaatgaaaagacctgatgaaataacccctcaaacggagttagaagagcaattt
caggccctttatgagcattatgaacgtcaaaaggagtatgatcaaaaatttgattttgat
gatatgttgttgaaatgcttacaacttttcggagaaaacgagaaactattaaaaaaatac
caaaagagatttcactatttcttagtcgatgaatttcaagacatcaatcctgttcagtat
aagctcttgcaactattatctaaacaaaccaataatatttgtgcagtgggggatgacgac
caatctatttatagtttcagaggaagtgaaccttctttcatattgaattttaaaaaagat
tatcctaatgccaaaatggttcaattaagtcataactatcgttctagtcatccaattgta
accagcgccaataaggtcatttcatttaacaaagaacgatttcaaaagaaaatacaagcc
gtttcaccatcaacacaatacccttttttattttttccatatgatgaggaagaggaagct
accatgatcgttgaagatataaaaggtaaaatccaaaatggtgcatcgccaaatgatttt
gccattttatatcgaacacacacagccggaagagctatatttgaacgattttgcgaatca
agcattccttttgaatttgaaaacggacaagactctttttataaaaaaagagttattaga
agcttactttctttctttaaaataagcctaaatcaagatgatacaagcgcactaaaagat
ttatttactgctttattcataaaacaatcacatataaacgaactgaaagccttgaccatc
ctccatgattgcccatacattgaagcactgccaaagcttccagatttattgcctttccaa
agaaaaaaattaaaggcactcgttaaagtgattcctactttaactaaaaaaacacctatt
caagcgattgaagtgattgaaaaagaacttggtttcggagatttcataaaaaaacgtggt
caagaaggaaataagatggataaaggttcagatgcgctacaagatttcaaagttgtcgct
aagaagttctctactattcatgaactattagatcatgtagaccatatgacggcaaaatca
caagaaaaaagtctctcttatcaagatagcgtccaactattaaccattcatcgttcaaaa
ggattagagtttaagaccgtttatgtgattggtgtagtagatggctcaatacctcatgac
tatgctctagactcatggcgaaagggtgaaaccctgccacttgaagaagaaagacgtctg
ttatatgtcgcaatgacaagagcaaaagaccaattgtatttatcagtaccagataatcgc
aggaccaaatctgtcaaaatatctcgtttcataaaaacactggctaggtaa
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