Bacillus carboniphilus: LC087_04105
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Entry
LC087_04105 CDS
T09277
Name
(GenBank) DNA-3-methyladenine glycosylase
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
bcao
Bacillus carboniphilus
Pathway
bcao03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bcao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LC087_04105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcao03400
]
LC087_04105
Enzymes [BR:
bcao01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
LC087_04105
DNA repair and recombination proteins [BR:
bcao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LC087_04105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
OGG_N
AlkA_N
Motif
Other DBs
NCBI-ProteinID:
WLR43374
LinkDB
All DBs
Position
complement(807390..808298)
Genome browser
AA seq
302 aa
AA seq
DB search
MTWKDEQTYIEIYPSNDFNFDECLFFLNRSNQEVLHQIIDGCLYKLLKIEEDLLLLKIKA
CKQGVRVDFPIHQPSISVRKKVASYIWDWFDFNTDLDPFYQMANTDPVLSKVAPNYKGLR
IIGIPDLFEALSWAIIGQQINLTFAYTLKKRLVEQFGESLTDEGHPFWLFPSYDRISTLR
IDDLTSLQFSTRKAEYIIGIAKQMTSGELSKEELIDIGDYDQTKERLTKIRGVGAWTADY
VMMKSLHHLNAFPISDVGLHNALKSVLNLDQKPSISEIKEFAARWQGWEAYATFYLWRSL
YV
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgacatggaaagacgaacaaacgtatattgaaatttatccatcaaacgactttaatttt
gatgagtgtttgttttttttaaacagatctaatcaagaagtgttacatcaaataatagat
ggatgtttatataagttacttaaaatagaagaagatctgcttttattgaagataaaagct
tgtaaacaaggagtaagagttgatttccccatacatcaaccgtcgatatctgtccgtaag
aaagttgcaagctatatatgggactggtttgactttaatacagacctagatcccttttat
caaatggccaatacagacccggtcctatcaaaggtagcacctaattataaaggactacgg
attattggtattccagatttatttgaagcactttcttgggcaatcattggacagcaaatt
aatttaacctttgcttatacgttaaagaaacgattagttgagcaatttggagaaagttta
actgatgaagggcatcctttttggctttttccttcgtatgacaggatttcaaccttgcga
atagatgatttaacatctcttcaattttccactcgtaaagcggagtatatcatcggaata
gcaaaacagatgacaagcggggaattatcaaaggaagagttaatagatataggagattat
gatcaaacaaaagagaggttaacgaaaataagaggtgttggggcctggacagcagattac
gtaatgatgaaaagtttgcaccatttgaatgcatttccaatttcagacgttggattacac
aatgcgctaaaatctgttttgaatcttgatcaaaagccaagtattagcgaaataaaggaa
tttgcggctcgctggcaaggatgggaagcctatgccactttttatttatggaggtcatta
tatgtgtaa
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