Bacillus carboniphilus: LC087_06540
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Entry
LC087_06540 CDS
T09277
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
bcao
Bacillus carboniphilus
Brite
KEGG Orthology (KO) [BR:
bcao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bcao03009
]
LC087_06540
Enzymes [BR:
bcao01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
LC087_06540
Ribosome biogenesis [BR:
bcao03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LC087_06540
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
S4_2
SMN_Tudor
DUF7443
Motif
Other DBs
NCBI-ProteinID:
WLR43781
LinkDB
All DBs
Position
complement(1280419..1281153)
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AA seq
244 aa
AA seq
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MERLQKVIAHAGVASRRKAEQLILEGKVTVNGQVIKELGTKVTNNDRIEVEGVPVNREAP
VYFLMYKPKKVISSAKDDKGRRTVVDFFDHIDKRIYPIGRLDYDTSGLLLLTNDGDFSNK
LMHPRYGIEKTYIAKVKGIPEREKLKQLERGVRLEDGKTAPARIKIQSIDKKKQTCIIEM
VIREGKNRQVRRMLDFIGHPIMKLKRERYAFLTLQGLKPGEIRELSPHEVKQIRALAEHG
RNAF
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atggaacgtttgcaaaaagtaatcgctcacgctggagttgcttctagacgtaaagcagaa
caattaatattagaaggaaaagtaacagtaaatggacaagtcattaaagaactaggaaca
aaagtgacaaacaatgatcgaatcgaagtggaaggtgtaccggtaaatcgagaagcgccg
gtgtattttttaatgtataaaccaaaaaaagtgatttcgagtgctaaagatgataaaggc
cgcaggaccgtggtggacttttttgatcatatagataaaagaatttatccaattggcaga
ctcgattatgatacatctggactgctattattaacaaacgatggcgacttttctaataaa
ttaatgcaccctcgttacggaattgaaaaaacctacattgctaaagtgaaaggaattcca
gaacgtgagaaactaaaacaattggaaagaggagtgcgtcttgaggatggaaaaacagct
cctgcaagaattaaaattcaatcaattgataagaaaaaacaaacatgtattattgaaatg
gtcataagagaagggaagaatcgtcaagttcgtcgcatgcttgattttattggtcatcct
atcatgaaactaaaaagagaacggtatgcctttcttaccttgcaaggattaaaaccggga
gagataagagaactctctccacatgaagtgaaacagatacgagctttagctgaacatgga
agaaacgctttctaa
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