Bacillus carboniphilus: LC087_07635
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Entry
LC087_07635 CDS
T09277
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
bcao
Bacillus carboniphilus
Brite
KEGG Orthology (KO) [BR:
bcao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcao03019
]
LC087_07635
03009 Ribosome biogenesis [BR:
bcao03009
]
LC087_07635
Enzymes [BR:
bcao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LC087_07635
Messenger RNA biogenesis [BR:
bcao03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LC087_07635
Ribosome biogenesis [BR:
bcao03009
]
Prokaryotic type
rRNA helicases
LC087_07635
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_30
CMS1
NAT10_TcmA_helicase
REV
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WLR43967
UniProt:
A0ABY9JZH4
LinkDB
All DBs
Position
complement(1487674..1488984)
Genome browser
AA seq
436 aa
AA seq
DB search
MEKTAFAQFDFKPFILEAISELSFSQPTEVQERMIPSILRGKSSIGQSQTGTGKTHAYLL
PLINNINPSDQEVQVVITAPTRELANQIYKEVINITSKCPEGQLIQANSFIGGTDKKRSI
EKLKKQPHIVVGTPGRILDIVKEQALDIHKAKTIVIDEADLMLDLGFIYEVDQLASRMVK
DLQILVFSATIPEKLKPFLKKYMENPSFTQVDPTQLIANNVENILVPIRHRNEISLVYDM
LQTFQPYLAMIFTNTKKRADEVANSLRDKGLEVALLHGGLQPRERKKVMKQVKELQFQYI
VATDLAARGIDIPGVSHIINIEIPMDLDFLIHRIGRTARAGNSGVAFTLFSEEDEEKISK
LEKLNVHFQNKDLINGEWVSIEDRNRRKNRKKQTQETDKIANRYVQKPKKVKPGYKKKMK
EEMDKVKRRERRKKKR
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaacagcgtttgctcaatttgattttaaaccttttatactagaagcgatctct
gaattaagcttctctcaaccgacggaagttcaagaacgaatgattccaagcattttaaga
gggaaaagttcaattggacagtctcaaacaggaacagggaaaacgcacgcttacctgtta
ccgttaattaataacataaatccaagtgatcaagaggttcaagttgtcattacagcacct
acaagagagcttgcaaatcaaatatataaagaagttattaatattacatctaaatgtcct
gaaggccaattaattcaggcaaattcatttatcggtgggacagacaaaaaaaggtcaata
gagaaattgaaaaaacaacctcatattgtagttggcactccagggcgtattctagatata
gtgaaagaacaggccttggatattcataaagcaaaaactattgtcattgatgaagcagac
cttatgcttgatttaggtttcatatatgaggttgatcagttggcaagtagaatggtgaaa
gacctacaaattctcgttttctctgctaccatacctgaaaagctaaagccgtttttaaag
aaatatatggaaaatccttcgtttactcaagtggatccaacccagcttattgccaataat
gttgaaaatattttagttcctattaggcatagaaatgaaattagtttagtatatgatatg
cttcaaacgtttcagccttatttagcgatgatttttactaatacgaaaaaacgagcagat
gaagtcgccaattctttaagagataaaggattagaggttgctttgctacatggaggattg
cagcctagagaacgaaaaaaggtaatgaaacaagtaaaagaattacaattccaatatatt
gtggctacagatttagccgctagaggaattgatataccaggggtttcccatatcattaat
attgaaattccaatggatttagattttttaattcatcgtataggtagaacagctcgagca
ggcaatagcggagttgccttcacattgtttagtgaagaggatgaagagaaaataagtaaa
cttgagaagttgaacgttcacttccaaaataaagatttaattaatggtgaatgggtgtcg
attgaggatcgtaatagaaggaaaaacagaaagaaacaaacccaggaaacagacaaaata
gcaaaccgttatgtacaaaagccgaagaaggttaaaccagggtataaaaagaaaatgaaa
gaagaaatggacaaagtaaaacgaagagagagaagaaagaaaaaaagatag
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