Bacillus carboniphilus: LC087_07845
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Entry
LC087_07845 CDS
T09277
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
bcao
Bacillus carboniphilus
Pathway
bcao03030
DNA replication
bcao03430
Mismatch repair
bcao03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bcao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LC087_07845 (holA)
03430 Mismatch repair
LC087_07845 (holA)
03440 Homologous recombination
LC087_07845 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bcao03032
]
LC087_07845 (holA)
03400 DNA repair and recombination proteins [BR:
bcao03400
]
LC087_07845 (holA)
Enzymes [BR:
bcao01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LC087_07845 (holA)
DNA replication proteins [BR:
bcao03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LC087_07845 (holA)
DNA repair and recombination proteins [BR:
bcao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LC087_07845 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
HP_1247_M
Motif
Other DBs
NCBI-ProteinID:
WLR44003
UniProt:
A0ABY9JYZ1
LinkDB
All DBs
Position
complement(1530442..1531455)
Genome browser
AA seq
337 aa
AA seq
DB search
MIKQWDKIQKKQVNPMYLLLGEDTYLIEETIKKLINNILTEEEKELNISVYDLEVQNIEE
AIDEAEILPFLGEKKIVIAKNPLFLTAQKGKIEHNIDALESYIKNIAPFTVFIVVAPYSK
LDERKKITKLIKKHAEVVDTNQFQEDDKRIWIKQFFEQAQLEIDEDALDQLLFLTGGHLM
AIQREMEKLRLFLDEGGVISKDVVMMLVPRTLEHNIFELIDKVVKKQASAALQIFFDLLK
NNEEPIKILALLVSQFRLIYQVKELMKQGYGQNQVAGQLKVHPYRVKLAYQQGQTFKEQD
LEKILYDLAEADYEMKTGKRDKQLILELFFTKLFKVA
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgattaagcaatgggacaagattcaaaaaaaacaggttaatcctatgtatttattgttg
ggtgaggatacatatttaatcgaagaaacgataaagaagctaatcaacaatattttaact
gaagaggaaaaagaattaaatatatctgtttatgacttagaagttcaaaatattgaagaa
gctatagatgaagcggaaatactaccatttttgggagaaaaaaagattgtaattgcaaaa
aatcctctttttttaacagctcaaaaagggaagattgagcataatattgatgcattagaa
agttatattaaaaatatagctccttttactgtgtttatagtcgttgctccctacagtaaa
ttagacgaacgaaaaaaaataacaaaactaataaaaaaacatgctgaagtagtagataca
aaccagtttcaagaagacgataagcgaatttggattaaacagttttttgaacaagcacag
ttggaaatagatgaggatgcattggatcaattgcttttccttactggaggtcatttaatg
gctattcaaagagaaatggagaagttgaggttgtttttagatgaaggtggagtgatttca
aaagatgttgttatgatgctagttcctcgaactttagagcataatatatttgaattaatc
gataaagtggtaaaaaagcaagcctcagcggctctgcaaattttcttcgatttattaaaa
aataatgaagaaccaatcaagattttagcattattagtttctcaattccgtcttatttat
caagtgaaagaattaatgaagcaagggtacggacaaaatcaagtagctggtcaattaaag
gttcacccttaccgagtaaagctagcttaccaacaaggacaaacgttcaaagaacaagat
ttagaaaaaatattatatgatcttgcagaagctgattatgaaatgaaaacgggaaaaaga
gacaagcagctaatattagagttgtttttcactaagctttttaaggtagcatag
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