Bacillus carboniphilus: LC087_09230
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Entry
LC087_09230 CDS
T09277
Name
(GenBank) pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
bcao
Bacillus carboniphilus
Brite
KEGG Orthology (KO) [BR:
bcao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bcao03009
]
LC087_09230
Enzymes [BR:
bcao01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
LC087_09230
Ribosome biogenesis [BR:
bcao03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
LC087_09230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
WLR41156
LinkDB
All DBs
Position
complement(1814464..1815186)
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AA seq
240 aa
AA seq
DB search
MRIDKLLANQGYGSRKEVKQLLKSGQVKLNNQIIKEAKYKVNPEEDSVVIDGEVVKYKEY
VYYVMNKPSGVISATEDDKHKTVIDLLDKEDAVYQPFPVGRLDKDTEGLLIITNDGQLSH
QLLSPKKHVPKTYYARINGQVTESHIELFRKGIVLEDGYKAKPANLKIEKSGDVSSIFVT
VTEGKFHQVKRMFEAINTKVIYLKRVQMGPLSLDSSLRLGEYRELSEEEVKRLQNADQTN
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgagaattgataaactactagctaatcaaggatatggtagtcgaaaagaagtcaaacaa
ttactgaaatctggtcaagttaagctcaataatcaaatcattaaagaagcaaaatacaag
gtgaacccagaggaagatagcgttgttatagatggtgaggtagtgaagtacaaggagtat
gtctattatgtaatgaataaaccctcaggtgttatttctgcaaccgaggatgacaaacat
aaaacggtgattgaccttcttgataaagaggatgcggtttatcagccgtttcctgtagga
aggttagataaagatacagaaggattattaattataacaaacgatggtcagctatcccat
cagctactttcacctaaaaagcatgttccgaaaacgtactatgcgaggattaatggacaa
gtaacggaatcacacatcgagttgtttcgtaaaggaattgtcctagaagatggttataaa
gcgaaacctgctaacctgaagattgaaaaatcaggagatgtttcatctatatttgtaacg
gtaacagaagggaagtttcatcaagtgaaacgaatgtttgaagcaattaatacaaaggtc
atttatttaaaaagggtgcaaatgggaccattaagtcttgattcctcattgaggttaggg
gaatatcgagagctatcggaagaggaagttaaacggcttcaaaatgcggatcagacgaac
tag
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integrated database retrieval system
