Bacillus carboniphilus: LC087_14420
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Entry
LC087_14420 CDS
T09277
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
bcao
Bacillus carboniphilus
Pathway
bcao03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bcao00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LC087_14420 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bcao03021
]
LC087_14420 (rpoC)
03400 DNA repair and recombination proteins [BR:
bcao03400
]
LC087_14420 (rpoC)
Enzymes [BR:
bcao01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LC087_14420 (rpoC)
Transcription machinery [BR:
bcao03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LC087_14420 (rpoC)
DNA repair and recombination proteins [BR:
bcao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LC087_14420 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
Motif
Other DBs
NCBI-ProteinID:
WLR41972
LinkDB
All DBs
Position
2822947..2825019
Genome browser
AA seq
690 aa
AA seq
DB search
MLDVNNFEYMNIGLASPDKIRSWSHGEVKKPETINYRTLKPEKDGLFCERIFGPTKDWEC
HCGKYKRVRYKGVVCDRCGVEVTRAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRALEEVIYFASYVVTDIGDTPLEKKQLLSEKEYRTYREKYGTTFQASMGAEAIKKLLQ
DIDLEKEVDVLKEDLKTSQGQRRTRAIKRLEVIESFRGSSNDPDWMILDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPSIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPNLKMYQCGLPKE
MALELFKPFVMRELVSKQLAHNIKSAKRKIERLHSEVWDVLEEVIKEHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLAAEAQAEARILMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTLERAGAIGEGMVFKNSDEALIAYQNGYVHLHSRIAIA
ASSLQNQTFTEEQNKQLLVTTVGKLIFNEILPESFPYMNEPTTGNIAEKTPEKYFVDPTT
NVKEFIAEQETVLPFKKGILGKIIAQVFKQFHITETSKMLDRLKDLGFKYSTKAGITVGV
SDIIVLAEKQEIIDELRKKLIISINSLKEV
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
ttgctagatgtaaataactttgagtatatgaacatcggtctcgcatcacctgataaaatt
cgttcatggtcccatggtgaagtaaaaaaaccagaaacaattaactatcgtacattaaaa
cctgaaaaagacggtctgttttgtgagcgtatctttggtccaacaaaggattgggaatgt
cattgcgggaaatataaacgggttcggtataagggtgtcgtttgtgatagatgtggtgta
gaagtgacaagagcaaaggttcgcagggaaagaatggggcacattgagttagctgctcct
gtctctcacatatggtatttcaaaggaatacctagtcgaatgggacttgttttagatatg
tctcctcgagcgttagaagaagtcatttactttgcgtcatatgtcgttacagacattggt
gatacacctcttgagaaaaaacagctattgtctgaaaaagaatatcgaacataccgtgaa
aagtatggaacgacattccaagcatctatgggtgcagaggctataaaaaaattattgcaa
gacattgaccttgaaaaagaggttgatgttttaaaagaagatttaaagacctcacaagga
caaagaagaactagagcaattaaaagattagaagttattgagtcgtttcgtggctcgagc
aatgaccctgactggatgatattggatgtattgccagttataccaccagagctccgtcct
atggtgcaattagatggaggtagatttgcgacttctgacttaaatgatctatatcgaagg
gtaattaaccgaaataatcgtctaaaacgattgttagatttgggtgctccaagcatcatt
gttcaaaatgagaagaggatgcttcaagaagctgtagatgccttaatagataacggtcgt
cgtggaagacctgtgacaggaccgggtaaccgaccattaaaatctctttcacatatgtta
aagggtaaacaaggtcgtttccgtcaaaatcttttagggaaacgtgttgattattcaggg
cgttcagttattgttgtaggtcctaaccttaagatgtatcaatgtggtttaccgaaagaa
atggcgttagaattgtttaaaccatttgtaatgagagaactagtatcaaaacagctagct
cataacattaaaagtgcaaagcgtaaaatagaacgattacattcagaagtatgggatgtc
ttagaagaagtcattaaagaacatcctgtgttgctaaaccgtgcacctacgcttcataga
ttagggatacaggcgtttgaacctacattagtagaaggaagagcgattcgcctacaccca
cttgtatgtaccgcttataatgctgactttgatggtgaccaaatggcggttcacgtacca
ttagctgcagaagcacaagcagaggctcgaattttgatgcttgcagctcaaaacatcttg
aacccaaaagatggaaaacctgttgttacaccgtctcaagatatggtattaggtaactac
tacttaacacttgaacgtgctggagcgattggtgaaggaatggtttttaaaaacagtgat
gaagcccttattgcataccaaaatgggtatgttcacttacattctcgaattgcaattgct
gcttcatctttacaaaatcaaacatttacagaagagcaaaacaaacagttgcttgtaaca
actgtcggaaagcttattttcaatgaaattcttcctgaatcgttcccttacatgaatgaa
ccgacgacggggaatattgctgaaaagacgccagagaaatattttgttgatccgacaaca
aatgtgaaggaatttattgctgaacaagagacggttttaccatttaaaaaaggtatttta
ggtaagattattgctcaagtatttaagcagttccatattaccgaaacatctaaaatgtta
gatcgcttaaaagacttaggatttaaatattcaacaaaagcaggtattacagtaggggtt
tcagatattattgttcttgcagaaaaacaagaaattattgatgaactcagaaaaaagttg
ataatatccataaacagtttaaaagaggtttga
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