Bacillus carboniphilus: LC087_14605
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Entry
LC087_14605 CDS
T09277
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
bcao
Bacillus carboniphilus
Pathway
bcao03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bcao00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LC087_14605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bcao03021
]
LC087_14605
03400 DNA repair and recombination proteins [BR:
bcao03400
]
LC087_14605
Enzymes [BR:
bcao01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LC087_14605
Transcription machinery [BR:
bcao03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LC087_14605
DNA repair and recombination proteins [BR:
bcao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LC087_14605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SpoIVA_ATPase
Motif
Other DBs
NCBI-ProteinID:
WLR42008
LinkDB
All DBs
Position
2845667..2846611
Genome browser
AA seq
314 aa
AA seq
DB search
MIEIEKPKIETVEISDDAKYGKFVVEPLERGYGTTLGNSLRRILISSLPGAAITTIQIDG
VLHEFSTVEGVVEDVTTIILNLKKLALKIYSEEEKTLEIDIQGEGPITAADITHDSDVEI
LNPDLHIATLAENSHLRMRMTAERGRGYTPADSNKHEDQPIGVIPIDSIFTPVSRVSYQV
ENTRVGQISNYDKLVLDVWTDGSIGPKEAIALGSKIFTEHLNIFVSLTDEAQNAEIMVEK
EEDQKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELANKTEEDMMKVRNLGRKSLEEVK
GKLEELGLGLRKDD
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgatcgagattgaaaaaccaaaaattgaaaccgttgaaatcagcgatgatgccaagtat
ggtaaattcgtcgtcgaaccacttgagcgtggatatggtacaacattgggtaactcctta
cgtcgtatactcatatcctcactccctggtgctgctataactaccattcaaatcgatgga
gtattgcatgagttctccaccgtcgagggtgttgtagaggatgttactaccatcatattg
aacttaaagaaactagctttaaagatctattctgaagaagaaaagacgctagaaattgat
atacaaggtgaaggtcctatcactgctgctgatattacacatgatagtgatgtagaaatt
ttaaatccggacctccatatcgctactttggctgagaattcacatcttcgtatgagaatg
actgctgaacgtggacgtgggtacacacctgccgattctaataagcatgaagatcagccg
ataggagttattcctattgattcaatcttcactcctgtctctcgtgtttcatatcaagtt
gaaaatactagagtaggtcaaatctctaactatgataaattggttcttgatgtttggaca
gatggaagtatcggtccgaaagaagccattgcattgggttcaaaaatcttcactgaacac
ttaaacatctttgttagtttgacagatgaagcgcaaaatgcagaaatcatggttgagaag
gaagaggatcaaaaagaaaaagtgcttgaaatgactatagaagaactagatctttctgtt
cgttcatataactgcttaaaacgtgctggaataaatacagttcaagagttagccaacaaa
acagaagaagacatgatgaaggttcgtaacttaggtcgcaagtctctagaagaagttaaa
gggaagttagaggagctaggattaggtcttcgaaaagatgactag
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