Bacillus carboniphilus: LC087_17110
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Entry
LC087_17110 CDS
T09277
Name
(GenBank) RNA-guided endonuclease TnpB family protein
KO
K07496
putative transposase
Organism
bcao
Bacillus carboniphilus
Brite
KEGG Orthology (KO) [BR:
bcao00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
LC087_17110
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Cas12f1-like_TNB
OrfB_IS605
HTH_OrfB_IS605
YjdM
Motif
Other DBs
NCBI-ProteinID:
WLR42401
UniProt:
A0ABY9JSN1
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All DBs
Position
3279883..3280995
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AA seq
370 aa
AA seq
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MTKLNKAYKFRIYPTREQASLIRRTFGCVRFVYNKMLDDRKKTYEKYKDDKETLKMQKFP
TPAQYKQEFKWLKEVDSLALANAQINLQKAYQNFFAKKADFPTFKSRKSRQSYTTNVVNG
NIKLIDGLIKLPKLTWIKIKQHRPIPDGHKIKACTISMTKTGKFFVSILTEYEKKIVEQP
AHLLIGLDFVMNGLFVDSETGKKANYPRFYRQMVEKLAKESRILARRTKGSSRWHQQRLK
VAKIHEKIANQRKDFLHKQSYRLANQYDCVIIEDLDMKGMSQALKFGKSVADNAWGRFTS
YLEYKLKEQGKKLIKIDKWFPSSKTCSNCGQIKEELTLSDRVFHCHCGFSSDRDWNASIN
IKNEGIRKLT
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
gtgacaaagctaaacaaggcgtataaattccgtatctatcctacacgtgaacaagcttct
cttattcgcagaacctttggttgtgtgcgttttgtgtacaacaaaatgttagatgaccgt
aagaaaacctatgagaaatataaggatgataaggaaaccttgaaaatgcaaaagttcccg
acacctgcccagtacaaacaagaattcaaatggttgaaggaagttgattcactcgcttta
gcgaatgcacaaatcaatcttcaaaaagcgtatcaaaacttctttgctaaaaaggctgac
tttcctaccttcaaaagtcgtaaatcgagacaatcctatacaacaaatgtggtcaatggg
aatattaaacttatagatggattgatcaaactaccaaaactgacatggataaaaatcaaa
cagcatcgcccaatacctgatggacataagataaaagcatgtacgatctccatgactaaa
acagggaagttttttgtgtccatcttgactgaatatgaaaagaaaattgtagaacaacca
gctcatttattgattggtctagactttgtgatgaatggcttatttgtcgatagtgaaaca
ggtaagaaagccaattaccctcgtttttatcgtcaaatggtagagaagctagccaaagaa
agccgcatattagctagacgaacaaaaggctcttctcgttggcatcaacagcgcttaaaa
gtagcgaaaattcatgagaaaatcgccaaccaaagaaaagactttcttcataaacagtct
tatagactcgcaaaccaatacgattgcgtcattattgaagacctcgatatgaaagggatg
tctcaagcattgaagtttggtaaaagtgtagctgataatgcctgggggaggttcacatcc
tatttagagtacaagttaaaagaacaaggaaagaaactaatcaagattgataaatggttt
ccttcttcaaaaacgtgctcaaattgcggtcaaatcaaggaagaattgacgctttctgac
cgagtgttccattgtcattgtggattctcatccgatcgtgattggaatgcgtcaatcaat
atcaaaaacgaaggtattcgaaagcttacataa
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