KEGG   Brucella canis SVA13: DA85_00780
Entry
DA85_00780        CDS       T03305                                 
Name
(GenBank) RNA polymerase sigma54 factor
  KO
K03092  RNA polymerase sigma-54 factor
Organism
bcas  Brucella canis SVA13
Pathway
bcas02020  Two-component system
bcas02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:bcas00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    DA85_00780
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    DA85_00780
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bcas03021]
    DA85_00780
Transcription machinery [BR:bcas03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     DA85_00780
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID Arg_repressor Phage_CII HTH_21
Other DBs
NCBI-ProteinID: AHZ80533
LinkDB
Position
1:174721..176223
AA seq 500 aa
MALSPKLDIRQSQSLVMTPQLMQSIKLLQMTHIELDQFLDMEIEKNPLLDRIEADSDDLA
GGEPASGADDPTESADNDDWFQTEGAGAAENLSATFDNSLENIFPDDLGSSQEQWKLSAG
EGAFSGNGYDIDQVTAGRLSLSDYVAEQIVLGFSKAADRFIATALADALDESGYLRIDIV
GLAHNLGIETAEIGRILGVLQGFDPPGLFARDLRECLAIQLRLKDRFDPAMEALIANLDL
LARRDFATLQKICGVDQADLIDMLAEIRALDSKPGARFEVSVADTIVPDVLVFSARDGGW
AIELNPATMPRLIVNNEYYAEVSGSVKTEEKAFLTDCMQTAGWLVRSLDQRARTILKVAQ
EIVRQQDGFLRHGVAHLKPLNLRMVADAVGMHESTISRVTANKFMATPRGVFELRYFFTA
SLASSEGGEAHSSESVRHRIRQVIEAEKPDEVLSDDAIVDALKKDGVDIARRTVAKYREA
MNIASSVQRRREKKARFSTP
NT seq 1503 nt   +upstreamnt  +downstreamnt
atggccctgtcgcctaaacttgatatccgtcaatcgcaatcgctggtgatgacaccccag
ctcatgcagtcgatcaagctgctacagatgacgcatatcgagctcgatcagtttctcgac
atggaaattgaaaaaaatccgcttctggacaggatcgaggcagacagtgatgatcttgcg
ggcggcgagcctgcatccggcgcagacgaccccactgaaagcgccgataacgatgactgg
ttccagaccgagggggcgggcgccgccgaaaacctttccgccactttcgataattccctg
gaaaacatttttcctgatgatctgggctccagccaagagcaatggaaactgtctgcgggc
gagggggcgttttccggcaacggctatgatatcgatcaggtaacggcaggccgcctgtcg
ctcagtgactatgtggccgaacagatcgtgcttggcttctcgaaggcggccgaccgtttc
atcgcgacggcgctcgccgatgcgctggatgaaagcggttatcttcgtatcgatattgtc
gggcttgcacacaatctggggatcgagaccgccgagatcgggcgcattctgggtgtgctg
caaggctttgatccaccagggctttttgcgcgcgatctgcgtgaatgccttgcaatccag
ttgcgtctcaaggaccgcttcgatccggcgatggaagccctgatcgccaatctcgatctt
ctggcccggcgcgattttgcaacactccagaaaatctgcggcgtcgatcaggcggacctg
atcgacatgctggccgaaatccgcgcgctcgattcgaagcccggcgcgcgttttgaggtg
tcggttgccgatacgatcgtgccggatgtgctggttttttccgcgcgtgatggtggctgg
gcgatcgagctcaatccggcaaccatgccccgcctcatcgtcaacaatgaatattatgcc
gaggtgagcggctcggtgaagacagaggaaaaggcatttcttaccgattgcatgcagacg
gcaggctggctggtgcgcagccttgatcagcgtgcgcgcaccatcttgaaagtagcgcag
gagatcgtgcgccagcaggatggtttcctgcgccatggcgtggcgcatctgaagccgctg
aacctgcgcatggtcgccgatgcagtgggtatgcacgaatcgaccatcagccgcgtcacc
gccaacaagtttatggcaaccccgcgcggcgtgtttgaattgcgctacttctttaccgct
tcgcttgcctcatcggaaggaggcgaagcccattcctccgaaagcgtgcgccatcgcatc
cgccaggtgatcgaggcggaaaagcccgatgaagttctctccgatgatgccatcgtggat
gcgctgaaaaaggacggtgtggatatcgcccgccgcaccgtggcgaaatatcgggaagcg
atgaatatcgcttcctccgtacaacgccggcgcgaaaagaaggcacgcttttcaacgccg
taa

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