Brucella canis SVA13: DA85_05945
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Entry
DA85_05945 CDS
T03305
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
bcas
Brucella canis SVA13
Pathway
bcas03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bcas00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DA85_05945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bcas03021
]
DA85_05945
03400 DNA repair and recombination proteins [BR:
bcas03400
]
DA85_05945
Enzymes [BR:
bcas01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DA85_05945
Transcription machinery [BR:
bcas03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
DA85_05945
DNA repair and recombination proteins [BR:
bcas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
DA85_05945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Biotin_lipoyl_2
RPOC_hybrid
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
AHZ81480
LinkDB
All DBs
Position
1:complement(1205866..1210068)
Genome browser
AA seq
1400 aa
AA seq
DB search
MNQEVMNLFNPQAPAQTFDSIRISIASPEKILSWSYGEIKKPETINYRTFKPERDGLFCA
RIFGPIKDYECLCGKYKRMKYKGIICEKCGVEVTLSRVRRERMGHIELAAPVAHIWFLKS
LPSRIGTLLDMTLKDIERVLYFENYIVTEPGLTSLKEHQLLSEEEYMIAVDEFGEDQFTA
LIGAEAIYELLASMELEKIAADLRVDLAETTSDLKQKKLMKRLKIVENFLESGNRPEWMI
MKIVPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPGIIIRNEKRM
LQEAVDALFDNGRRGRVITGANKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVTG
PELKLHQCGLPKKMALELFKPFIYARLDAKGYSSTVKQAKKLVEKERPEVWDILDEVIRE
HPVLLNRAPTLHRLGIQAFEPTLIEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSLEAQL
EARVLMMSTNNILHPANGAPIIVPSQDMVLGLYYLSIVAEKEPGEGMIFADMGELQHALE
NKVVTLHTKIKGRFKTVDAEGNPVSKIYDTTPGRMIMGELLPKNVNVPFDICNQEMTKKN
ISKMIDHVYRHCGQKETVIFCDRIMQLGFAHACRAGISFGKDDMVIPESKAKIVAETEAL
TTEYEQQYNDGLITQGEKYNKVVDAWGKATDKITEEMMARLKAVEFDPVTGRQKQMNSVY
MMSHSGARGSVNQMRQLGGMRGLMAKPSGEIIETPIISNFKEGLTVNEYFNSTHGARKGL
ADTALKTANSGYLTRRLVDVAQDAIISEVDCGAEIGLTMQPIVDAGQIVASIGQRVLGRT
ALDPILHPVTGEVIVEAGRMIEEKDVEIIEKAGIQSIRIRSALTCETRDGVCAKCYGRDL
ARGTPVNQGEAVGVIAAQSIGEPGTQLTMRTFHLGGTAQVVDSSYLEASYEGTVKLRNRN
VVRNSDGNLVVMGRNMAVLILDATGKERAVHRVTYGSRLFVDEGDTVKRGQRIAEWDPYT
RPIMTEVEGYVEFEDLVDGLSVSETADESTGITKRVVIDWRSTPRGSDLKPAMVIKDKAG
KILKLSKGGDARFLLSVESILSVEPGAHVKAGDVIARLPMESAKTKDITGGLPRVAELFE
ARRPKDHAIIAEIDGTVRFGRDYKNKRRIIIEPNDDTIEPVEYLIPKGKPFHLQDGDVIE
KGEYILDGNPAPHDILAIKGVEALASYLVNEIQEVYRLQGVLINDKHIEVIVRQMLQKVE
ITESGDTGYIPGDHVDRIELEEINERLIEEGKKPGSGNPVLLGITKASLQTPSFISAASF
QETTRVLTEAAVAGKMDTLQGLKENVIVGRLIPAGTGGMTNQIRRIATARDELIIDERRK
TSGSAEANAMLVDMTNNAAE
NT seq
4203 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaagaggtcatgaatcttttcaatcctcaggctccggcgcaaacgttcgattcc
atcagaatctcgatcgccagccctgagaagattctgtcctggtcatacggcgagatcaag
aagccggagacgatcaactaccgtacgttcaagccagaacgcgatggtctcttctgcgcg
cgcatcttcggcccgatcaaggactatgaatgcttgtgcggcaagtacaagcgtatgaaa
tacaagggcatcatctgcgaaaaatgcggcgtggaagtcacgctttcccgcgttcgccgc
gagcgcatgggccatatcgaacttgcagcaccggttgcgcatatctggttcctgaagtcg
ctgccaagccgcatcggcacgcttctggacatgacgctcaaggatatcgagcgcgtcctg
tactttgaaaactacatcgtcaccgaacccggcctgacctcgctgaaggagcaccagctt
ctgtcagaagaggaatatatgatcgccgtcgatgaattcggcgaagatcagttcacggcg
ctcatcggggcggaagcgatctacgaactgctggcttcgatggaacttgaaaagatcgct
gcggacctgcgcgtcgatctggccgagaccacttcggacctgaagcagaagaagctgatg
aagcgtctgaagatcgtcgagaacttcctggagtcgggaaaccgcccggaatggatgatc
atgaagatcgttccggtgatcccgccggatctgcgcccgctcgtgccgctggatggcggt
cgttttgcgacgtcggatctcaacgatctctatcgccgcgtcatcaaccgtaacaaccgt
ctgaagcgcctgatcgaactgcgcgcgccgggcatcatcatccgcaacgaaaagcgcatg
ttgcaggaagctgtcgatgcgctgttcgacaacggccgtcgcggccgcgtcatcaccggt
gccaacaagcgcccgctgaagtcgctgtccgacatgctcaagggcaagcagggccgcttc
cgtcagaacctgctcggcaagcgcgtggactattcaggccgttcggtcatcgtgaccggc
ccggaactgaagctgcaccagtgcggcctgccgaagaagatggcgctcgaactgttcaag
ccgttcatctatgcgcgtcttgacgccaagggctattcgtccaccgtcaagcaggcgaag
aagctggttgaaaaggaacgcccggaagtctgggatatccttgacgaagtgatccgcgag
catccggttcttctgaaccgtgccccgacgctgcaccgtctcggcatccaggcgtttgaa
ccgaccctgatcgaaggcaaggccattcagcttcatccgctcgtctgcacggcgttcaat
gccgacttcgacggcgaccagatggctgttcacgttccgctttcgcttgaagcccagctt
gaagcgcgcgtgctgatgatgtcgaccaacaacatcctgcatccggccaacggcgcaccg
atcatcgttccgtcacaggatatggttctcggcctctattatctgtccatcgtggcggag
aaggagccgggcgagggcatgatattcgccgatatgggcgagctacaacatgcgcttgaa
aacaaggtcgtcacgctgcacaccaagatcaagggccgtttcaagacggtcgatgccgaa
ggcaaccctgtgtcgaagatttacgacacgacgccgggccgcatgatcatgggtgaattg
ctgccgaagaacgtcaacgttccgttcgatatctgcaatcaggagatgaccaagaagaac
atctccaagatgatcgaccatgtttaccgccattgcggccagaaagagacggttatcttc
tgtgaccgcatcatgcagcttggttttgcccatgcttgccgtgcgggtatctccttcggc
aaggatgacatggtcatcccggaatcgaaggccaagatcgttgcggaaaccgaagcgctt
acgaccgaatacgaacagcagtacaatgacggcctgattacgcagggcgaaaagtacaac
aaggtcgttgacgcctggggcaaggcaaccgacaagatcaccgaagagatgatggcgcgc
ctgaaggccgtcgaattcgatccggtgaccggtcgccagaagcagatgaactcggtctac
atgatgtcgcattcgggtgcccgtggttcggtcaaccagatgcgccagcttggcggcatg
cgcggcctgatggccaagccgtcgggtgaaatcatcgagaccccgatcatctcgaacttc
aaggaaggcctgaccgtgaacgagtacttcaactcgacccacggcgcccgcaagggtctg
gcagacaccgccttgaagacggccaactcgggctacctgacccgtcgtctcgttgacgtt
gcacaggatgcgattatttcggaagtcgattgcggcgccgaaatcggtctcaccatgcag
cccatcgtcgatgccggccagatcgtcgcctcgatcggccagcgcgttctgggccgtacg
gctctcgatccgatcctgcatccggtaaccggcgaagtcatcgtcgaggctggccgcatg
atcgaggagaaggacgtcgagatcatcgagaaggctggcatccagtcgattcgcatccgt
tcggccctcacctgtgaaacccgcgacggcgtttgcgccaagtgctatggccgcgacctt
gcacgcggcacgccggtcaaccagggtgaagctgtcggcgttatcgccgctcagtcgatc
ggcgagccgggcacccagctcaccatgcgtaccttccacttgggcggtaccgcacaggtg
gtcgacagctcctatcttgaagcttcgtatgaaggcaccgtcaagctgcgcaaccgcaat
gtggttcgcaactccgatggcaacctcgtggtgatgggccgtaacatggctgtcctgatc
ctcgacgctacgggcaaggaacgtgcggtccatcgcgtgacctatggttcgcgtctgttc
gtggacgagggcgatacggtcaagcgcggccagcgcattgccgagtgggatccgtatacc
cgtccgatcatgacggaagttgaaggctacgttgagtttgaagatctcgtcgatggtctg
tcggtttcggaaacggccgacgagtcgactggtatcaccaagcgcgttgtcatcgactgg
cgttcgaccccgcgcggttcggatctcaagcctgccatggtcatcaaggacaaggccggc
aagatcctgaaactgtcgaagggtggcgatgcccgcttcctgctctccgtggaatcgatc
ctttcggttgagccgggcgcgcatgtgaaggctggcgacgttatcgcccgtctgccgatg
gaaagcgccaagaccaaggacatcaccggtggtctgccgcgcgtggctgaactgtttgaa
gctcgccgtccgaaggaccacgccatcatcgccgagatcgatggtaccgtccgtttcggt
cgcgactacaagaacaagcgccgcatcattatcgagccgaacgacgatacgatcgagccg
gttgagtatctcattccgaagggcaagccgttccatcttcaggacggtgacgtcatcgaa
aagggtgagtatatcctcgacggcaacccggcaccgcatgacattctggcgatcaagggc
gtggaagctctggcttcctacctcgtgaacgaaatccaggaagtctatcgcttgcagggc
gttttgatcaacgacaagcacatcgaagtgatcgttcgccagatgttgcagaaggtggaa
atcacggaatccggcgataccggctatattccgggtgaccacgttgaccgcatcgagctg
gaagagatcaacgaacgtcttatcgaagaaggcaagaagccgggctccggcaatcctgtc
ctcctcggtatcaccaaggcttcgctgcagacgccttcgttcatctcggccgcgtcgttc
caggaaacgacccgtgtgctgaccgaagctgcggttgccggtaagatggacacgttgcag
ggtctcaaggaaaacgtcatcgtcggccgtctcatcccggccggtactggcggcatgacc
aaccagatccgtcgcatcgcaaccgcgcgcgacgaactgattatcgacgaacgtcgcaag
acttccggttcggccgaagcaaatgcgatgctagttgatatgaccaacaacgctgccgaa
taa
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