Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043: BBCT_0337
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Entry
BBCT_0337 CDS
T03931
Name
(GenBank) tRNA pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
bcat
Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043
Brite
KEGG Orthology (KO) [BR:
bcat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bcat03016
]
BBCT_0337
Enzymes [BR:
bcat01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
BBCT_0337
Transfer RNA biogenesis [BR:
bcat03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BBCT_0337
Prokaryotic type
BBCT_0337
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
BAR01305
UniProt:
A0ABM7ETR1
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All DBs
Position
414262..415182
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AA seq
306 aa
AA seq
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MLIAVRLRIDLAYDGTDFYGWAKQPDMRTVQGEIERVLHTILRVPEGDDNEPLRLTVAGR
TDTGVHASHQVCHLDINEETLARCVGHMQVEPVMALTRRLQRMLPNDIAIHSIKEAPEGF
DARFSALERTYVYRIADRSSEIDPRTRNSVLHIDDNLDIAVMNKAAEMTIGLHDFGSFAT
PNPGGTTIREVKTAYWRRIPQHPLIDDGTTMGERYRTPALESGLLCFTIVADAFARNMVR
SLVNGCVQVGIGKRSLDWFAGKMATPLREGSTGPIAPQGLTLEHIEYPEDDQLAIRAEAI
RAKRTL
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgctcattgccgtgagattacgtatcgacttggcatatgacggcaccgatttttacgga
tgggcgaaacagcctgacatgcgcaccgtgcagggggaaatcgaacgtgtgctgcatacc
attctgcgcgtgccggaaggcgacgacaatgagccgctgcgcctgaccgtcgcaggtcgt
actgataccggcgtgcacgcgtcgcaccaagtttgccatctcgacatcaatgaggagacg
cttgcacgttgcgtcgggcatatgcaggtcgaaccggtgatggcgttgacgcgacgactg
caacgcatgctgccgaacgatatcgccattcattccatcaaagaggctcctgaaggattc
gacgcacgcttctccgcgttggaacgcacttacgtatatcgcattgccgaccgatcaagc
gaaatcgatccacgtaccagaaatagcgtgctgcatatagacgataatcttgacatcgcc
gtcatgaacaaggctgctgaaatgacaatcggtctgcatgatttcggctcgttcgcaact
cccaatccaggaggaaccaccatacgcgaggtcaaaaccgcgtattggaggcgcataccg
cagcatccgcttatcgacgacggaaccaccatgggggagcggtaccgaacgcccgccttg
gagtcgggactgctctgcttcaccatcgtcgccgacgctttcgcacgcaatatggtgcgt
tcgttggttaacggttgcgtacaggttggtattggcaaacgttccttggattggttcgcc
ggaaaaatggcgacgccgttgcgtgaaggcagcactggcccgatcgctccgcaaggattg
acgctcgaacatatcgaatatccggaagacgaccagttggcgattcgtgccgaagcgatt
cgtgcgaaacgtactttgtaa
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