Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043: BBCT_0345
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Entry
BBCT_0345 CDS
T03931
Name
(GenBank) DNA repair protein
KO
K04485
DNA repair protein RadA/Sms
Organism
bcat
Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043
Brite
KEGG Orthology (KO) [BR:
bcat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcat03400
]
BBCT_0345
DNA repair and recombination proteins [BR:
bcat03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BBCT_0345
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
Zn_ribbon_LapB
ATPase
DnaB_C
ABC_tran
ChlI
DUF7125
Lon_C
Rad51
SLFN-g3_helicase
AAA_22
AAA_16
NACHT
TniB
EAD2
AAA_29
AAA
nSTAND_NTPase5
AAA_24
Isochorismatase
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
BAR01313
UniProt:
A0ABM7ETS3
LinkDB
All DBs
Position
complement(424217..425665)
Genome browser
AA seq
482 aa
AA seq
DB search
MSQNIRIVGGMAKTSSQFVCSECGWNGPKWLGRCPECGQWGTIEEFHEARPAASKRTAAP
GRTSRTQSHTVPASAAKPITEIGTENISRISTGFTEFNRILGGGIVPGSVTLIAGEPGIG
KSTLLLETAGNVARLCAAQPERNTVLYISGEESQAQVRMRASRIGAVEPNLLLSATTDLS
TVLGLIEQSKPALAIVDSAQTIVSQEVDGISGGSTQVREVASALIDTAKTLDIPVLLVGH
VTKDGSIAGPRTLEHLVDVVCQFEGDAETALRMLRAVKNRFGPTDEVGCFDMSGEGIEEV
TDPSGLFLSSSNSASSAPVEGTCVTFTLDGHRSLPIEVQSLVTKSVLPTPRRAANGVDAN
RIAMLVAVLYRHGNVNLLANDLYISTIAGGQAREPGCDLAIVGALASAAKSKAIGRTTCA
IGEISLTGQVRPVPRLEYRLREAARLGFTTAVVPTLRREIAIPGLSIVQVDTLQDALGAM
LR
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
ttgtctcaaaatatccgtattgtcggcggtatggcaaagacgtcctcacaatttgtatgt
tccgaatgcggctggaatggcccgaaatggttgggccgctgccccgaatgcggccagtgg
ggcaccatcgaggaatttcacgaggcccgtcccgccgcttcgaaacgcaccgcggccccc
gggcgcacatcgcgcacgcaatcgcatacggtgcccgcttccgccgcaaagcccatcacg
gaaatcggcacggaaaacatttccagaatcagcacgggtttcacggaattcaaccgcata
ctcggcggcggcatcgtacccggctccgtaacgctcatcgcaggcgagccgggcatcggc
aaatcgacactgctgctggaaaccgccggcaacgtggcccgtctttgcgcggcgcaaccg
gaacgcaacacggtactgtatatttccggcgaggaatcgcaggcgcaggtgcgtatgcga
gcatcacgcataggcgcggtcgagccgaatctgctactgtccgccaccaccgacctgtcg
accgtgctcggactgatcgagcaaagcaagcctgcgctggccatcgtcgattccgcacag
accatcgtctcgcaggaagtcgacggaatttccggagggtcgacgcaggtgcgcgaagtg
gcgagcgccctgatcgacactgcaaaaacgcttgatattccagtattactggtcggtcat
gtcaccaaagacggctcgattgccggtccgcgcacgttggagcatctcgttgatgtggtc
tgccaattcgaaggggatgctgaaaccgcgcttcgcatgctgcgcgcggtgaagaatcgt
ttcggtcccaccgatgaggtcggctgtttcgatatgagcggcgaaggcatcgaagaggtg
acggacccgtctgggctttttctttcatcatccaattccgccagttccgctccggtggag
ggcacgtgcgtgacgttcaccttagacggccaccgcagcctgcccatcgaagtgcagtcg
ttggtcaccaaatcggtattgccgacgcctcgccgtgcggcgaatggcgtggatgcgaac
cgcatcgccatgctggtggcggtgctatacaggcatggcaacgtcaatcttctggcaaac
gatctctatatttccacaattgctggaggtcaggcacgtgagccgggctgcgatctggcg
attgtgggcgcgttggcgagcgccgcgaagtcgaaggcgattggccgcaccacgtgtgcg
atcggcgagatttcgttgaccgggcaggtgcgcccggtgccgcgactggaataccggttg
cgcgaggctgcccgtcttggcttcaccaccgctgtagtgccgacattacgtagagaaatc
gcaattcccggattgtcgatcgttcaggtcgacacattgcaggatgcgcttggcgccatg
ttgcgataa
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