Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043: BBCT_0542
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Entry
BBCT_0542 CDS
T03931
Name
(GenBank) DNA-directed RNA polymerase omega subunit
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
bcat
Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043
Pathway
bcat03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bcat00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BBCT_0542
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bcat03021
]
BBCT_0542
03400 DNA repair and recombination proteins [BR:
bcat03400
]
BBCT_0542
Enzymes [BR:
bcat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BBCT_0542
Transcription machinery [BR:
bcat03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BBCT_0542
DNA repair and recombination proteins [BR:
bcat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BBCT_0542
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
BAR01510
UniProt:
B6XXG6
LinkDB
All DBs
Position
665032..665316
Genome browser
AA seq
94 aa
AA seq
DB search
MAFGTQPTPTGLAEPPIDDLMEHADSKYALAIFAAKRARQINSYFTQLNEGLLQNVGPLV
EYQNQEKPLSIAFREINDGLLEETLGEDDLTEGN
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atggcattcggcactcagccaaccccgaccggtcttgcggaaccgccgatcgatgatttg
atggagcatgctgactccaagtacgcactggctattttcgcagccaagcgtgcccgtcag
atcaattcctatttcacccagcttaacgagggcctgctgcagaacgtcggtccgctggtg
gagtatcagaatcaggagaagccgctgtccatcgccttccgtgaaatcaacgacggtctg
cttgaggagaccctcggcgaagacgatctgaccgaaggtaactga
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