Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043: BBCT_1120
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Entry
BBCT_1120 CDS
T03931
Name
(GenBank) DNA topoisomerase IV subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
bcat
Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043
Brite
KEGG Orthology (KO) [BR:
bcat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bcat03032
]
BBCT_1120
03400 DNA repair and recombination proteins [BR:
bcat03400
]
BBCT_1120
Enzymes [BR:
bcat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
BBCT_1120
DNA replication proteins [BR:
bcat03032
]
Prokaryotic type
DNA Topoisomerases
BBCT_1120
DNA repair and recombination proteins [BR:
bcat03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BBCT_1120
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
LRIM1_dimer
DUF4890
PDDEXK_1
Inp1
Motif
Other DBs
NCBI-ProteinID:
BAR02088
UniProt:
B6XTS3
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All DBs
Position
1315200..1317887
Genome browser
AA seq
895 aa
AA seq
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MVSHRKSVKPAFDPRTVKENIVETPLNEEMSKSFLEYAYSVIYARALPDARDGLKPVQRR
IIYQMGQMNLNPDRPYMKSARVVGEVMGKLHPHGDSAIYEAMVRLAQPFAMRLPLVDGHG
NFGSLDDGPAASRYTEARMAQAALGMNANIAEDTVDFTPNYDNKLQEPTVLPAAIPNLLV
NGGSGIAVGMATNMATHNLGEVVAAAKYLMHHPDATLEELMRYVPGPDWPSGGVIVGRKG
IREAYETGRGALTTRSVTHIENVTARKKAIVVTELPFMVGPERVLERISEGVKNRKLEGI
SGAIDLTDRHNGTRLVIEIKTGFDPNAVLAQLFKHTPLQDNFTINNVALVNGRPHTMGLK
EMLQVWVNHRRVVIRRRSEFRKKKALERLHLVEGLLLAMVDIDEVIQVIRSSDDAEAAKT
KLIKVFDLDEIQAQYILDLRLRRLTKMSRIELEAERDDLKQRIEELDRILASAEALDDVV
IAEMDEAVATYGTPRRTVLLDEDADGRLVPVAAHGDDGVSASAVAAARAAATVSSAAADV
AAAAKAAKKAGEDNAAAMALQIDDEPCAVMLSATGLIARTSEDALERWENRSSADQRVKD
DQIISIFRTTTRSSYGLITSAGRLIVAHVVELPVVSADGPLHVTGGVHAEELIGTTENTD
PIRGERVIAAIAMPSADDSGDNAVEPTPLALGTRNGVVKRWNRESPTTMDSWSVIDLKDD
DEVLAAAEARDEDRLVFVSTDSSLLTFEAKNVRPQGRTAGGMAGIRLAEGCSAAAFAVVP
ASKVAWNYEEGENGLFSASGAVVLTVAGDSEALPGTENGSAKVTPLEMYPTKGRGTGGVR
SQRFLKGQDTLVLAFVGAYPVHASTQGGAGVELPKPDMRRDGSGTELSAPIAIIG
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcgcaccgcaaatcggtaaaaccagcctttgacccgcgtacggtcaaagagaac
atcgtcgaaacaccgttgaacgaggagatgagcaagtccttcctcgaatacgcgtattcg
gtgatctatgcccgcgcgttgcccgatgccagagacggtttgaagccggtgcagcgccgc
atcatctaccagatgggtcaaatgaacctcaatccggatcgtccgtacatgaagtcggcc
cgtgtggtcggcgaggtgatgggtaagcttcacccgcatggcgattccgcgatttatgag
gcgatggtccgtcttgcgcaaccgtttgccatgcgtctgcccctggtagacggccatggt
aatttcggatcccttgatgatggtccggcagcatcgcgttacaccgaggctcgcatggcc
caggctgcgcttggtatgaacgcgaatatcgccgaagatacagtggatttcacaccgaac
tacgacaacaagctgcaggagccaaccgttttacctgccgcgattccaaatctgctcgtc
aatggcggttccggcatcgccgtcggcatggccacgaatatggcgacgcacaatctgggc
gaagtggttgccgcagccaaatatttgatgcatcatcctgatgccacgttggaagagctt
atgcgctatgttcccggccctgattggccgagcggtggcgtgattgtgggacgcaagggc
attcgcgaggcctacgaaaccggtcgtggcgcgttgaccacgcgttcggtaacgcatatc
gaaaacgtaaccgctcgtaagaaggcaattgtcgtaacggaactgccgttcatggtcggc
ccggaacgtgtgttggaacgtatttccgagggtgtgaaaaatcgcaagctggagggtatt
tccggcgcgatcgatctgacggaccgccataacggcactcgccttgtcattgaaatcaaa
accggtttcgacccgaacgcagtactggcgcaactgttcaagcacacaccgctgcaagac
aatttcaccatcaataacgtggcgttggtcaacggtcgcccacacaccatgggtttgaag
gaaatgcttcaggtgtgggtaaatcatcgccgtgtggtgattcgccgtcgtagcgaattc
cgcaaaaagaaggcgctggaacgtctgcatttggttgaaggccttctgcttgcgatggtc
gacattgacgaagtgattcaggtgattcgctcgtctgacgatgccgaagccgcaaagacg
aagctcatcaaggtgtttgatctggatgagattcaggcacagtacattcttgacctgcgc
ttgcgtcgcctgacgaaaatgagccgcatcgagcttgaagcagaacgcgacgatttgaag
caacgtatcgaggaattggatcgcattctcgcctccgctgaggcgcttgacgacgtggtg
attgccgaaatggacgaggctgttgccacgtatggcacgccacgtcgcactgtgctgttg
gatgaagacgctgacggcaggcttgtgcctgttgcagcgcatggcgatgatggcgtatcc
gcctccgctgtggctgcggcacgcgctgcagccacagtgtcgtccgccgccgccgatgtc
gccgccgccgcgaaggccgcgaaaaaagccggtgaagacaatgccgcagccatggctttg
cagatcgacgacgagccgtgcgcggtgatgttgtcggccactggtctgattgcacgcacc
tccgaagacgcgttggagcgttgggagaatcgctcttctgccgaccagcgtgtaaaggat
gatcagattatttcgatcttccgcacgactacgcgttcctcatatggtttgatcacatct
gccggccgtctgattgtggcgcatgtcgtggaattgccggttgtgtctgcggatgggccg
ctccacgtgactggcggcgttcacgccgaagagttaatcggcacgacggaaaacaccgat
ccaattcgtggtgaacgtgtgatcgctgcgatcgccatgccatccgccgacgattccggt
gataatgccgtagagcccactcctcttgcattgggtacgcgcaatggtgtagtcaagcgt
tggaatcgcgaatcgcccaccaccatggattcatggagtgtcatcgatttgaaggatgat
gatgaagttctggctgccgctgaagcgcgtgacgaggatcggctggtgtttgtatccacc
gactcctccctgctgacgttcgaggcgaagaacgtacgcccgcagggacgcactgccgga
ggcatggcaggcattcgcctggctgaaggctgctcagcggctgcgttcgcggtagttccc
gccagcaaggtggcgtggaattatgaagaaggcgagaatggcctgttctccgcgtctgga
gctgtggtgttgacggttgcgggcgattccgaagcgttgccgggtacggagaatggttct
gcgaaggtaaccccgttggaaatgtatccgacgaagggccgcggtaccggtggcgttcgt
tcgcagcgcttcctcaagggacaggatacgttggttctcgcatttgtgggcgcataccca
gtacacgcctccacgcagggcggtgccggcgtggaattgccgaagccggatatgcgtcga
gatggctctggcacggagctttccgcaccaatcgccatcatcggctaa
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