Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043: BBCT_1256
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Entry
BBCT_1256 CDS
T03931
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
bcat
Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043
Pathway
bcat03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bcat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BBCT_1256
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcat03400
]
BBCT_1256
DNA repair and recombination proteins [BR:
bcat03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BBCT_1256
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BBCT_1256
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
DUF8075
Motif
Other DBs
NCBI-ProteinID:
BAR02224
UniProt:
A0ABM7EX11
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Position
complement(1482666..1483394)
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AA seq
242 aa
AA seq
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MPLYQDEGVVLRTVKLGEADRIVTLLTRDHGKIRAVAKGVRRTKSRFGGRLEPFMRVSLL
IAEGRSLDVISQAESVSAYARGICTDFKAYTAANVICETADKLVVTEHERSVAQYRLVLG
ALNALSKHAHEAAVIGDSYVMRALAIAGWTPRLRACVVCGDPISADRTWFFSISAGGLMC
STDHIRESFDVSWNAICQLQALVDGDWGELDGTALFSETRQMVEKWGEYYLERPIRSMRL
LD
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgccgttgtatcaggacgagggcgtggtcttgcgcaccgtcaaacttggcgaagctgat
cgtatcgtcactttgctgacacgcgaccatggcaaaatccgtgccgtcgccaaaggcgtg
cgccgaaccaaatcgcgtttcggaggtcgtttggagcctttcatgcgtgtctcgttgctt
attgcggagggacgttcgcttgatgtgatttcccaagccgagtcggtgtcggcgtatgcg
agaggcatctgcaccgatttcaaggcgtataccgcagcgaatgtgatttgcgaaaccgct
gacaagctggtggtgacggagcatgagcgttccgtggcgcagtatcggctggtgttggga
gcattgaatgctctttccaagcatgcgcatgaggctgctgtgattggcgattcctacgtg
atgcgtgctcttgcgatcgctggttggacgccgcgtttgcgtgcctgcgtggtgtgcggg
gatccgatttctgctgatcgtacatggtttttctcgatttccgcgggcggactgatgtgt
tcgaccgatcatattcgtgaatcgtttgacgtttcgtggaatgcgatctgccagttgcag
gcgcttgtagatggcgattggggagagctggacggcacggcgttgttttcggaaacccgc
caaatggtggaaaaatggggcgaatactatttggaacgtccgattcgttccatgcgcttg
ctagattag
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