KEGG   Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043: BBCT_1327
Entry
BBCT_1327         CDS       T03931                                 
Name
(GenBank) putative helicase
  KO
K03658  DNA helicase IV [EC:5.6.2.4]
Organism
bcat  Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043
Brite
KEGG Orthology (KO) [BR:bcat00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bcat03400]
    BBCT_1327
Enzymes [BR:bcat01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BBCT_1327
DNA repair and recombination proteins [BR:bcat03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    BBCT_1327
SSDB
Motif
Pfam: UvrD-helicase AAA_19 UvrD_C UvrD_C_2 Zn_ribbon_Top1 AAA_30 AAA_11 DEAD Asparaginase_C DUF3051
Other DBs
NCBI-ProteinID: BAR02295
LinkDB
Position
1576712..1578772
AA seq 686 aa
MGLLSKFMNALGGEPPVSKPATQPVLRTAQQNVPKPTQQQTTQHKSTAQSRQAQQPTQPS
QSSQLARSSYRAQTQTTARNTSVTTNRSRAQSHANSQPAQKLMPQPLLPTDQIERMQNII
GKIEKHDLSDEQISAIAGAGHNTLVLAGAGTGKTTTIIGYIAWLLATKRAAPEEILVLSF
TKASAGDMSQRIMASTGKTIRACTFHSLGLEICRAATIANRPIIDGHTSNTVVRNTFEQL
LSKNIGYRLLAFKLMSKELLGKYGKAAKSEDFQLPTDDYGFNQYKQNLIENAQTIIQHMR
QNSIGIDGMRELNERSGGKNVGRNREMLQLIEPLYNAYISNFRTTHGIDFPGMITDAIRC
IQRGAYRHPYKYVLIDEYQDMSRPRYELIRALREQSDFTLFCVGDDWQSIYRFAGSDIHL
ILDFAEIWRTWGPTRMFQITTTRRFRQSLIDASGAFVMQDKSLYVKHLHNPSDKKDYSLK
ALGGATQEERFDAIIEQLRKLPKTASVLMLGRYKSDLNLLSRNDRDGLFQIDEHTGGIVF
LEKPKMDIEFMTAHKSKGLQRDFVFLLCCSGGLKGFPSAIPEEPLLGLLLPEVERMPHAE
ERRLFYVAMTRCRKKLFFVVDQSRPSRFMYELHDRICPNIFRGVKLPPQCPNCGEALRLR
HAGSDPSRKFYGCTGFPNCRYTQQCK
NT seq 2061 nt   +upstreamnt  +downstreamnt
atgggattactgagcaagttcatgaacgcacttggcggagaaccgcctgtctccaaaccg
gcgactcagcccgtcctcaggaccgcgcagcaaaacgttcccaagcccacgcaacagcag
acgacgcaacacaagtccaccgcacaatcacgtcaagcgcaacagcctacgcagccatcc
caatcatcacaattggcgcgatcgtcataccgcgcgcaaacacaaaccacagctcgcaat
acttccgtcacaacgaatcgttcgcgagcgcaatctcatgccaattcacaaccggcgcag
aagcttatgccgcaaccgttgcttcccaccgatcagattgagcggatgcagaatatcatc
ggcaaaatcgaaaagcacgatttgagcgacgagcaaatcagtgcaatcgcaggagcgggc
cacaataccctcgtgctcgcgggcgcgggaacaggcaaaaccaccaccattatcggatat
atcgcatggctgctcgccacgaagcgcgccgcccctgaagaaattcttgtactgtcgttc
accaaggcgtccgcgggcgacatgtcgcaacgtatcatggcaagcaccggcaaaacgatc
cgcgcatgcacgttccacagtctcggcttggaaatctgccgcgcggccaccatcgccaac
cgtcccatcatcgacgggcacacgtcgaacacggtggtccgcaacacattcgagcaactg
ctttcgaaaaacatcggctaccgtctgctggcattcaaactcatgtcgaaggaactgctc
ggcaaatacggcaaagccgcgaaaagcgaggatttccagctgccgacggatgattacggc
ttcaaccagtacaagcagaatctcatcgaaaacgcgcagaccatcatccagcatatgcgt
cagaacagcatcggtatcgacggtatgcgcgagctcaacgaacgcagcggcggcaaaaac
gtcggccgcaatcgcgagatgttgcaactcatcgagcccctctacaacgcgtacatcagc
aatttccgcacgacgcatggcattgattttcccggcatgatcaccgacgccatccgctgc
atacagcgcggcgcctaccgtcacccatacaagtacgtgctcatcgacgaataccaggac
atgtcgcgaccgcgctacgaactgatccgcgcattgcgcgagcagagcgatttcacgctg
ttctgcgtgggcgacgactggcagtcaatctaccgtttcgccggcagcgacattcatctc
atccttgatttcgccgaaatttggcgcacttggggcccgacgcgcatgttccagatcacc
accacgcgacgattccgacagagtctcatcgacgcgagcggcgcgtttgtcatgcaggac
aaaagcctgtatgtcaagcatttgcataatccatccgataagaaggattattcgctgaag
gcgcttggcggcgccacgcaggaggagcgcttcgacgcgatcatcgagcagttacgcaag
ctgccgaaaaccgcgtcggtacttatgctgggacgttacaaaagcgatctgaatctgctg
tcacgcaacgatcgcgacggattgttccagattgacgagcacactggtggcattgtgttc
cttgagaagccaaagatggatatcgagttcatgaccgcgcataaatccaagggtctgcaa
cgcgacttcgtttttctgctgtgctgttccggcggtttgaaaggcttcccgagcgcgatt
cccgaagagccgctgctcggtctgctgctgccggaagtggaacggatgccgcatgcggag
gaacgtcgcctattttatgtggcgatgacgcgctgccggaagaaactgtttttcgtggtc
gaccagtcgcgtccatcgcggtttatgtacgaattgcatgacaggatctgcccgaacatc
ttccgtggcgtgaaactgccaccgcagtgcccaaattgcggagaagccttgcgattgcgg
catgccggctccgacccgtcgcgcaagttctacggttgcaccggttttccaaattgccgg
tacacgcagcagtgcaagtag

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