Brevibacterium casei: I6G59_00580
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Entry
I6G59_00580 CDS
T06973
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
bcau
Brevibacterium casei
Pathway
bcau03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bcau00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
I6G59_00580
09124 Replication and repair
03420 Nucleotide excision repair
I6G59_00580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bcau03021
]
I6G59_00580
03400 DNA repair and recombination proteins [BR:
bcau03400
]
I6G59_00580
Enzymes [BR:
bcau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
I6G59_00580
Transcription machinery [BR:
bcau03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
I6G59_00580
DNA repair and recombination proteins [BR:
bcau03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
I6G59_00580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
Motif
Other DBs
NCBI-ProteinID:
QPS33884
UniProt:
A0A7T2THM0
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All DBs
Position
130857..132491
Genome browser
AA seq
544 aa
AA seq
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MNGPLIVQSDRTVLLESGHPLAVEAAVAIAPFAQLARTPEYIHTYTITPLGLWNARASGH
DAESVVDVLLEFAKYPVPHELLVDIVDIMDRFGVLTLIDHPLHGLTLTSTETELLDRLVG
QPDLVGKFGRRLDAESVLVHPSERGELKHALLQLGHPVSDHAGYVDGEAHDIVLSDDAHG
GQWHLRDYQREAIDQSLAGESGVVVLPCGAGKTVVGVATMSRVQTTTLILVTNSVSAKQW
KDEILARTTLTEDEIGEYSGSVKEIRPITIATYQVLTTRRKGSYLHLELLDAKDWGLVIY
DEVHLLPAPIFRLTASLQARRRLGLTATLVREDGREDEVFSLIGPKQYEVPWKELERLGF
IATAACHEVRVRLDGGTRTAYARADGEDRYRLAATSDAKLPIVRSLVAEHPDAQILVIGQ
YLDQLEEIGAELDAPVLTGQTPESQRQQLFRDFRSGAIRVLVVSKVANFSVDLPAASVAI
QVSGAFGSRQEEAQRLGRILRPKEDAGSATFYTVVAADTVDEHFAAQRRRFLTEQGYSYD
IEVR
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgaacggacccctcatcgtccagtccgaccggaccgtgctcctcgaatcgggccatccc
ctggccgtcgaggcggccgtggcgatcgccccgttcgcgcagctcgcgcgcaccccggag
tacatccacacgtacacgatcaccccgctgggactgtggaacgcgcgcgcgagcgggcat
gacgcggagtcggtcgtcgacgtcctcctcgagttcgcgaagtacccggtgccccacgag
ctgctcgtcgacatcgtcgacatcatggaccggttcggggtgctcacgctcatcgaccac
cccctccacgggctcaccctgacgtcgacggagaccgagctgctcgaccggctcgtcggc
cagcccgacctcgtcggcaagttcggcaggcgcctcgatgccgaatccgtcctcgtccac
ccctccgagcgcggggagctcaagcatgcgctcctccagctcgggcacccggtctccgac
catgccggctacgtcgacggcgaagcccacgacatcgtgctcagcgacgacgcccacggc
gggcagtggcatctgcgcgactaccagcgcgaggcgatcgaccagtcgctggccggggag
tccggggtcgtcgtcctcccctgcggggcgggcaagaccgtcgtcggggtcgcgacgatg
tcgcgggtgcagacgacgacgctcatcctcgtgacgaactcggtctcggcgaagcagtgg
aaggatgagatcctcgcgcgcaccaccctgaccgaggacgagatcggcgaatactcgggc
tcggtcaaggagatccgaccgatcacgatcgccacctaccaggtgctcacaacgcggcgg
aagggatcgtatctccatctcgaactcctcgacgcgaaagactgggggctcgtcatctat
gacgaggtccacctccttccggccccgatcttccggctcaccgcgtccctgcaggcgagg
cggaggctggggctgacggcgaccctcgtgcgcgaggacggccgggaggacgaggtgttc
tccctcatcgggccgaagcagtacgaggtgccgtggaaggagctcgaacgtctcgggttc
atcgccaccgccgcctgccatgaggtccgggtgcgcctcgacgggggcacccggacggcg
tacgcccgcgccgacggggaggaccgctaccggttggccgcgacttcggatgcgaagctg
ccgatcgtccgcagcctcgtcgccgagcacccggacgcgcagatcctcgtcatcgggcag
tacctcgaccagctcgaggagatcggtgcggagctcgacgcgcccgtgctcaccggccag
accccggagtcgcagcgccagcagctcttccgcgacttccgctccggcgccatccgcgtc
ctcgtcgtctccaaggtcgcgaacttctccgtcgacctgcccgccgcctcggtggcgatc
caggtctccggggcgttcgggtcccggcaggaggaggcgcagcgcctcggccgcatcctc
cgcccgaaggaggatgctggctcggcgacgttctacaccgtcgtcgccgccgacaccgtc
gacgagcacttcgccgcccaacgccgccggttcctcaccgagcagggctacagctacgac
atcgaagtccgctag
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