Brevibacterium casei: I6G59_01955
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Entry
I6G59_01955 CDS
T06973
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bcau
Brevibacterium casei
Pathway
bcau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bcau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I6G59_01955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcau03019
]
I6G59_01955
03400 DNA repair and recombination proteins [BR:
bcau03400
]
I6G59_01955
Enzymes [BR:
bcau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
I6G59_01955
Messenger RNA biogenesis [BR:
bcau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
I6G59_01955
DNA repair and recombination proteins [BR:
bcau03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
I6G59_01955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
HTH_IclR
Cas3-like_C_2
MRFAP1
HEM4
MarR_2
Motif
Other DBs
NCBI-ProteinID:
QPS34122
UniProt:
A0A165EA80
LinkDB
All DBs
Position
complement(439317..441422)
Genome browser
AA seq
701 aa
AA seq
DB search
MTENSLLTDFDADARTVLAELTGNPNAEFRDGQLEAIRDLVVGRRRVLVVQRTGWGKSAV
YFVATRLLRAAGGGPSLIISPLLALMRDQIAAAERAGVRAATLNSSNVTEWDDVLDELRA
GSLDVLLISPERLNNPQFRDEVLPQLMRFLGLIVVDEAHCISDWGHDFRPDYRRIGHILS
ELPGDTPVLATTATANSRVVTDVAEQLGDDTTVVRGELARDSLRLGVQPGLDPSARIAWL
ASHLGDFTGSGIVYTLTVSAAEDITRILRDQGHEVRAYTGRTDAEERAELEQMLKDNRLK
ALIATSALGMGFDKPDLGFVVHVGAPSSAVAYYQQVGRAGRATESADVLLLPGAEDTEIW
EYFATASMPSQSDANAVLTALAEADGPLSVARLETLVGTKRTRLQLLLKTLEVEDAVEKV
RGGYVSTGRGWTYDQERYEKVAEVRGAEAQAMLDYESTGACRMEFLIRQLDDPDPRPCGR
CDNCAGVWWSTEITEASRQDAAGTLHRIGLPIEARSTWPSGMANIGVSLKGRIPADELAE
EGRVIARLSDLGQGQVLREFLAPDAPDAEVPSQIGKWCLQVLGEWDWAVRPEVVVSIPSA
RRPVTVRSLAANLASAGRLIDGGELLQVHDHGTPDVNSAFRVKDLHDAFVVPPEVAEAVA
GKAVLLVDDEIVSRWTMAIAARQLRLAGAAAVLPFALAMRG
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgacggagaacagcctgctcaccgacttcgacgccgacgcacggaccgtgctcgccgaa
ctcacgggcaacccgaacgccgagttccgcgacggtcagctcgaggcgatccgcgacctc
gtcgtcggccgcaggcgcgtcctcgtcgtccaacgcaccggctggggcaagtccgccgtc
tacttcgtcgccacccgcctcctccgtgccgccggcgggggtccgagtctcatcatctcc
ccgctgctcgccctcatgcgcgaccagatcgccgccgccgagcgggccggggtccgggcg
gcgacgctgaattcctcgaacgtcaccgaatgggacgacgtcctcgacgaactgcgcgcc
ggcagcctcgacgtcctcctcatctccccggaacggctgaacaacccgcagttccgcgac
gaggtgctgccccagctcatgcgcttcctcggcctcatcgtcgtcgacgaagcccactgc
atctccgactgggggcacgacttccgccccgactatcgacggatcggccacatcctctca
gagctccccggggacacccctgtgctcgcgacgacggcgacggcgaactcccgcgtcgtc
accgacgtcgccgaacagctcggtgacgacacgaccgtcgtccgcggggagctcgcccgc
gactccctgcgcctcggcgtccaacccggcctcgaccccagcgcgcggatcgcgtggctg
gcctcccacctcggcgacttcaccggatcgggcatcgtctacacgctcacggtctccgcg
gccgaggacatcacccggatcctgcgcgaccaaggccacgaagtgcgcgcctacacgggg
cggacggacgcagaggagcgggccgaactcgagcagatgctcaaggacaaccggctcaag
gcgctcatcgccacctcggcgctggggatgggattcgacaaacccgacctcggattcgtc
gtccatgtcggcgcgccctcctcggccgtcgcctactaccagcaggtcggtcgcgccggt
cgcgccaccgaatccgccgacgtcctcctcctgcccggggccgaggacacggagatctgg
gagtacttcgcgaccgcgtcgatgccgagccagtccgatgcgaacgccgtcctcaccgcc
ctcgccgaggcggacggccccctgtccgtcgcccgcttggagacgctcgtggggacgaag
cggacccgactgcagctgctgctcaagaccctcgaggtcgaggacgccgtcgagaaggtc
cgcggcgggtacgtctccaccggccgaggctggacctatgaccaggagcgctacgagaag
gtcgccgaggtgcgcggcgccgaggcgcaggcgatgctcgactacgagtcgaccggtgcc
tgtcggatggagttcctcatccgccagctcgacgacccggatccgcgcccgtgcggacgc
tgcgacaactgcgccggggtgtggtggtcgacggagatcacggaagccagccgccaggac
gcggccgggacgctccaccggatcgggctgccgatcgaagcgcggagcacgtggccgtcg
gggatggcgaacatcggggtctccctcaagggccggattcccgccgacgagctcgccgag
gagggacgcgtcatcgcgcgcctgagcgatctcggccaggggcaggtgctgcgggagttc
ctcgcccccgatgctcccgatgccgaggttccgtcgcagatcgggaagtggtgcctgcag
gtgctcggcgaatgggactgggcggtccgccccgaggtcgtcgtgtcgatcccgagcgcg
cggcgcccggtcacggtgcgctcactcgcggcgaacctcgcctcggcgggacggctgatc
gacggcggtgagctgctccaggtccacgaccacggcactcccgacgtcaacagtgccttc
cgcgtcaaagacctccatgacgcgttcgtcgttccccctgaggtcgccgaggcggtcgcc
ggcaaggcggtcctcctcgtcgacgacgagatcgtctcccggtggacgatggcgatcgcc
gcccgtcagctgcgactggccggtgctgccgcggtgctcccgttcgccctggcgatgcga
gggtga
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