Brevibacterium casei: I6G59_11330
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Entry
I6G59_11330 CDS
T06973
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
bcau
Brevibacterium casei
Pathway
bcau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bcau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I6G59_11330 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bcau03021
]
I6G59_11330 (rho)
03019 Messenger RNA biogenesis [BR:
bcau03019
]
I6G59_11330 (rho)
Transcription machinery [BR:
bcau03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
I6G59_11330 (rho)
Messenger RNA biogenesis [BR:
bcau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
I6G59_11330 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
AAA_25
AAA_22
Spore_III_AA
ATPase_2
NACHT
ResIII
CDC27
Motif
Other DBs
NCBI-ProteinID:
QPS32599
UniProt:
A0A7T2TF08
LinkDB
All DBs
Position
2536711..2538672
Genome browser
AA seq
653 aa
AA seq
DB search
MSETTTPDSTPRTGSLTALRLPQLQEMAAGMGIKGYRRLRKGELIDAINNQGGSNAPAAD
SAPAVTTEDAKRSRRPARRSAASASRADQQTEDAQSAEATAPEARTETETQAPEGDEQGQ
DRQRSRRSRSRSRGGDAEAETQSAEARDDSAERGNRRGRRGDDDRRGDDRKGDRDNDRRD
NERRGEDRKGDRDNDRKGERGGNDRRGRQGEGDDRGDDRGNRNDRRDNDRRDNDRRNRDD
DERGGRRGRGRDRKRRGRGGDEPEIRSDDVLIPVGGILDVHDNYAFLRTSGYLPGPNDVY
VSASMVRKNGLRKGDAVAGAIRQPRENERGGKREKFDALVRLDSVNGLSVDDAKGRVEFS
KLTPLYPQERLRLETTSKLQSTRLIDLVTPIGKGQRGLIVAPPKAGKTTIMQQVANAITE
NNPEVHLMVVLVDERPEEVTDMQRAVKGEVIASTFDRPADDHTTIAELAIERAKRLVEMG
SDVVVLLDNITRLGRAYNIAQPASGRILSGGVDANALYPPKKFFGAARNIEGGGSLTILA
TALVETGSKMDEVIFEEFKGTGNMELRLSRQLADKRIFPAVDVNASSTRREEMLMTPEET
KVMWRLRRLLSGLEQQQAVELLMSKLKETGSNAEFLMQVQKTTPLPKSSTDEH
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgaaaccacaaccccggattccacaccgcgcaccggcagtctgaccgctctgcgc
cttccccagctgcaggagatggcagccggaatgggaatcaaaggataccgtcgacttcgc
aagggcgaactcatcgacgccatcaacaaccagggcggctcgaacgcgcccgccgccgac
tcggctccggccgtgaccaccgaggacgccaagcgctcccgccgtcccgcgcgccgcagc
gccgcctccgcctctcgcgcggatcagcagaccgaggacgcgcagtccgccgaggcgacc
gcccccgaggcccgcaccgagaccgagacccaggcgcccgagggcgacgagcagggtcag
gaccgccagcgcagccgccggagccgttcgcgctcccgcggcggtgacgccgaggccgag
acgcagtccgccgaggcgcgtgacgattccgctgagcgcggaaaccgtcgaggccgccgc
ggtgacgacgaccgccgcggcgacgaccgcaagggcgaccgcgacaacgaccgccgggac
aacgagcggcggggcgaggaccgcaagggagaccgtgacaacgaccgcaagggcgagcgg
ggcggcaatgaccgtcgcggccgtcagggcgagggcgatgaccgtggcgacgaccgcggc
aatcgcaacgaccgtcgtgacaacgaccgtcgcgacaacgaccgtcgcaaccgcgacgat
gacgagcgcggtggccgccgcggtcggggacgggaccgcaagcgccgcggacgcggcggc
gacgagccggagatccgcagcgacgacgtcctcatccccgtcggcggcatcctcgacgtc
cacgacaactacgccttcctccgcacctcgggctacctgcccgggcccaacgacgtctac
gtctcggcctcgatggtgcgcaagaacggtctgcgcaagggcgacgccgtcgccggcgcg
atccgtcagccgcgggagaacgagcgcgggggcaagcgtgagaagttcgacgccctcgtc
cgcctcgactcggtcaacggactgagcgtcgacgatgcgaagggccgcgtcgagttctcg
aagctcacgcccctctacccgcaggagcgtctgcgcctcgagaccacctcgaagctccag
tcgacgcgcctcatcgatctcgtcacgccgatcggcaagggccagcgcggcctcatcgtc
gccccgcccaaggccggcaagacgacgatcatgcagcaggtcgccaacgcgatcacggag
aacaatccggaagtccacctcatggtcgtcctcgtcgacgaacgccccgaagaggtcacg
gacatgcagcgcgccgtcaagggcgaggtcatcgcctcgaccttcgaccgtcccgccgac
gaccacacgacgatcgccgaactcgccatcgagcgcgccaagcgcctcgtcgagatgggc
tccgacgtcgtcgtcctcctcgacaacatcacgcgcctgggccgggcgtacaacatcgcg
cagccggcctcgggccgcatcctctccggtggtgtcgacgcgaacgcgctctacccgccg
aagaagttcttcggcgccgcccgcaacatcgagggcggcggctccctgacgatcctcgcc
accgcgctcgtcgagacgggctcgaagatggacgaggtgatcttcgaggagttcaagggc
accggcaacatggagctgcgtctgtcccgccagctcgcggacaagcgcatcttcccggcc
gtcgacgtcaacgcctcgtcgacgcgtcgcgaggagatgctcatgacgccggaggagacc
aaggtgatgtggcgcctgcgccgcctcctctcgggtctcgagcagcagcaggccgtcgaa
ctcctcatgtccaagctcaaggagaccggctcgaacgccgagttcctcatgcaggtgcag
aagacgacgccgctgccgaagtcctcgaccgacgaacactga
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